Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1391 ATGGGTCTTCTCTTCTTCTTCCTCTCTACAATGTCCCTTCAAACACTACTATTTCTCTCCTTCTTTCCCCTGTTTCTCTTTCTCCATTCCGCCGCCGCCGCCGACCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCTTTACCTCCTTCTCAACCTCCATCTTCCTTCTCCCCTTTGCCTCAACCACAGCACCAGCAGCCTAAACTCCCCTTTTCCTCCACTTCCTTCTCCTCTCCTCCTAAACCCTTTTTCCCATCCTACCCCTCCTCGCCGCCGCCGCCTCCGTCGCCCCCCTCCACGGCGCTTCCCACTTTTCCGGCCAACATTTCTGCCCTTCTCTTCCCTCAACCCACTTCCTCTTCCCAACACCTCCACCGCCATGTCTTCGCCATTGTCATCTCTGTTTCTCTCGTTTCCTCTGTTCTTGTGCTCCTCGCTGCTCTGTTTCTTTACTTCCGAAGGCGAAACCGACAAACCTCTGTTGCTGATAAGGCCTTGAGGACTGATAATCTCCGCCTGTACCCGCCGGATATTGACACCTCCGACGGCGTTCACAAGCACAGAACCTCCTCGACTACGAGCTCGAAGTTTCTTTATCTTGGGACTTTGGCTACTTCAAGAGAGATTGATGAGGAGGCTGCCGGAATCGTGGAGGACGGTGGCGGGATTGTGGAATCGGCGTCGCCGGTGAAAATGGGGTCGCCGGAACTTAAGCCCCTTCCACCGCTTCCTCGGCGGAATTTCACTGAAGATTATAGGAGTGGAGATGGTAATAGTAACAATGGCTATGATGGCTACGACGATGGCGACGGTGATGACGAGGAGTTCTTTTCGCCGAGAGGGTCTTCCGTCGGCGGGAAGGAGAATGGGGGTAACAAAAGATTGAGCCCTGTGAAGTTGTTTCAAAACGTGGAAAGTGAAAATTTCTTGAGGAAAAGCTATAATTCGAGTTTGAATTCAGGTTCTCGTTCTGTTTCTGTTCCTAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGCTTGAGATCGAAGTCGCCTGACTCCATTGTAAGATTCCCTGTTCCTTTACGGCCATTGCCAACGCGTCCGGTACCGCCTTCGCCGTCATTGTCCTCTGCTTCTTCGCCGATGGGAGGTTCAGGGAATACCAAGAACTCCCCGTCGAGGGACTCCGATTTTTCAGAGCTGCATCGGCAGTTTTCGAACGGATTTAGAATGGATTACCAGCAACCGTTGCCGGTGAAGCTGCCACCGCCACCGCCTCCACCTCCGCCTCCAATGTTTTGGGAGATTCCTCCATCTTCCTCCCTTACCAACAAGGAGCCAAATCTAGGTCCACCGGTACTCGCCGGGCCATCGAGACCCATACTCTCACAGAACATGGTTCATATATCAGTAGGGGAGCAATCGAACGCCATTGGAGATGCAGAGAGAATGGAGGAAAATTCGAAGCCGAAACTCAAGCCATTACATTGGGACAAAGTTCGAACGAGCTCCGATCGAGCCATGGTGTGGGATCACATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTCACGGTGAATAACAATAATTCAAATCTGATGAGCAAAGAAAATGGTGGAGTTCGTCAAAACATGCCTTTAGGGAACCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGAGCTCTTAATGTCACCATTGAAGAAGTCTCTGAGGCCCTTTTGGAAGGCATTGCATGTGCCAATGACATAATAGAGACTGCTATTTGTACTTACTGTTTGTTTCGATTCTTTTGCTATGTTCATACAGGAAATTCAGATACTTTGGGCACCGAACTTCTCGAAAGTTTACTGAAAATGGCGCCAACGGAAGAGGAGGAGCGTAATTTGAGAGAGTACAAAGATGATTCGCCTTTTAAACTCGGCCCAGCTGAGAAATTCCTCAAGGTAGTTCTTGATGTACCTTTTGCATTCAAGAGGGTGGATGCAATGCTCTACATTGCCAATTTTGATTCTGAGGTCGAGTACCTCAATCGGTCCTTCGAAACTCTCGAGGCTGCTTGTAAAGAGTTGAAAAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTACTCAAAACTGGGAACCGGATGAACGTAGGCACGAACCGAGGCGATGCTCATGCCTTCAAACTTGACACCCTTCTCAAGCTTGTCGATATCAAGGGCACCGATGGAAAGACCACTCTCTTGCATTTCGTAGTGCAGGAGATCATTAGAGCTGAAGGCTACCGACACTCCACCTCCGATCACAACCCAACAGCCGATAAAACTCAACAATCTTCCTTAACAAACGATGTCGAGTTTCGAAAGCTTGGTCTTCAAGTTGTTTCAGGTCTTAGCAGGGAGCTCTCCAGTGTAAAAAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAGTGACGTAGCGAAACTCGCTGGTGGGATCACAAAAATCACTGAGGTGATTAGATTAAATGAAGACATGTTGAAAGGAGGGAGTAGGTCGAATTTCTCTGACTCGATGAACAGGTTCTTGGGGAAGGCAGCTGAAGAAATAGCAAGGACACAAGTCCAAGAGGGCATTGTTCTTTCCATGGTGAAGGAAATAACCGAATACTTCCACGGAAACTTAGCGAAAGAAGAAGCTCGGCCGCTGCGTATTTTCATGGTGGTAAAGGATTTTCTTACAATCTTAGATCAGGTATGCAAGGAAGTCGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGGCCTCCGAATCCAAGTCTTCCATCGATCTTCCCTGGATTATGCGAAAGTCAGCGCTATGGTTCGTCTGATGATGATAGCTCATCTTCCTCATCTTAG 2922 48.29 MGLLFFFLSTMSLQTLLFLSFFPLFLFLHSAAAADRHHRHLLHQPFFPWTSLPPSQPPSSFSPLPQPQHQQPKLPFSSTSFSSPPKPFFPSYPSSPPPPPSPPSTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVSSVLVLLAALFLYFRRRNRQTSVADKALRTDNLRLYPPDIDTSDGVHKHRTSSTTSSKFLYLGTLATSREIDEEAAGIVEDGGGIVESASPVKMGSPELKPLPPLPRRNFTEDYRSGDGNSNNGYDGYDDGDGDDEEFFSPRGSSVGGKENGGNKRLSPVKLFQNVESENFLRKSYNSSLNSGSRSVSVPNSPSPPLMLSPTSLRSKSPDSIVRFPVPLRPLPTRPVPPSPSLSSASSPMGGSGNTKNSPSRDSDFSELHRQFSNGFRMDYQQPLPVKLPPPPPPPPPPMFWEIPPSSSLTNKEPNLGPPVLAGPSRPILSQNMVHISVGEQSNAIGDAERMEENSKPKLKPLHWDKVRTSSDRAMVWDHIKSSSFQLNEEMIESLFTVNNNNSNLMSKENGGVRQNMPLGNQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGIACANDIIETAICTYCLFRFFCYVHTGNSDTLGTELLESLLKMAPTEEEERNLREYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFDSEVEYLNRSFETLEAACKELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDHNPTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSSVKKAALMDADVLSSDVAKLAGGITKITEVIRLNEDMLKGGSRSNFSDSMNRFLGKAAEEIARTQVQEGIVLSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLTILDQVCKEVGRINERTIVGSARQFTGPPNPSLPSIFPGLCESQRYGSSDDDSSSSSS 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21760863 21765240 + Maker00035303 Lcy7g1391 638223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1391 973 SUPERFAMILY Formin homology 2 domain (FH2 domain) 423 931 - -
Lcy7g1391 973 Gene3D Formin, FH2 domain 482 928 IPR042201 -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 71 85 - -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 231 300 - -
Lcy7g1391 973 SMART it6_source 483 933 IPR015425 -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 320 400 - -
Lcy7g1391 973 Coils Coil 687 707 - -
Lcy7g1391 973 ProSiteProfiles Formin homology-2 (FH2) domain profile. 483 944 IPR015425 -
Lcy7g1391 973 PANTHER FORMIN-RELATED 22 967 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lcy7g1391 973 MobiDBLite consensus disorder prediction 53 106 - -
Lcy7g1391 973 Pfam Formin Homology 2 Domain 486 918 IPR015425 -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 377 395 - -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 362 376 - -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 86 106 - -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 320 352 - -
Lcy7g1391 973 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g2127 Lcy-Chr2:42702276 Lcy7g1391 Lcy-Chr7:21760863 4.15E-111 dispersed
Lcy7g1391 Lcy-Chr7:21760863 Lcy9g1230 Lcy-Chr9:36767636 8.36E-101 dispersed
Lcy12g2003 Lcy-Chr12:41424567 Lcy7g1391 Lcy-Chr7:21760863 1.70E-189 transposed
Lcy7g1391 Lcy-Chr7:21760863 Lcy8g0729 Lcy-Chr8:26920107 2.23E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1391 K28090 - csv:101213912 1274.23