Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1441 ATGGGTGTTCCTAACTTCTTCTTAATCCTTCTTCCCGTCTCTTTCTTCTTCCAATTCCATCTCTCCCATTCTCAGAACCCCACAATTTGCCATTCCGATGATTCCAAGGTCTTGCAGGACTTCCACAGCGCTTTTCCTTCCCAAATCTACGGATGGCACACCAACTGTTCGACGAATTGCTGCACTTGTATTGGCCTCACTTGTGACTCTTCTGGGCGCCTTGTGAAGATGGAGCTTGGTGGGAGAAAGCTAAAGGGTCAATTACCAAACTCTATTGCTAGATTGGAGCACCTCAGAGTTCTCAATCTGTCCTCTAATTCCCTCACTGGCTTGGTTCCCTTGGCTCTGTTTCATCTCCCATACTTGGAAGTTCTTGATCTCAGCTCCAATGAGTTCCTTGGGAGCATCTCACCAGGTTTCATTAATTTGCCATCTATTCTGGTTCTTAATGTTTCTCGTAATTCCTTTGATGGTGGTCTTCCACTTGGGGTTTGTGTTAACTCCTCTAGAATTGAGATTCTGAATCTGGGTTTCAATAATTTCTCTGGTGTGTTTCCTGTTGAGCTTGCTGAATGTGTTTCCCTGAAGAGACTGTTTGTGGAATCGAATTTTATCAGTGGTGGGATACCTGATGAGGCTTCTGGATTAAGGAGATTGACCCATTTTAATGTTCAGAACAACAAGCTTTCTGGTTCTTTGAATGGTGTTGTTGGGAATCTCACGAGCCTTGTTCGGTTGGATTTGTCATCTAATGGGTTTTCTGGGGAAATTCCTGATGTTTTTTACAATTCTAGGAATTTGAGTCACTTTGTTGCAGAGTCTAACAGGTTTAGTGGGAAAATTCCCAATTCCCTGTCAAACTCTGCTTCTCTCACTGTCCTCAATTTGAGGAACAATTCAATAGAGGGAACTCTTGATCTTAATTGTTCAGCAATGAAAAGCCTGGTTACACTTGATTTAGGCACTAATAGGTTTCATGGCTCTATACCAAGTAATCTTCCCTCTTGTACCCAACTGAGAAGTATAAACCTTGCTAGGAACAACCTTGGTGGTCAGATCCCTGAAAGCTTTAGGAATTTTCAGAGCCTCTCGTATTTATCACTTACGAATACGAGCATTGTTAATGTTTCGTCTGCCCTTAATATCTTGCAACATTGCCAGAATTTGAGTACTGTGGTTCTTACCTTTAATTTCCGTGATGAAGTGTTGGAAGATGATCCTAACTTGCATTTCAAGAGCCTCCAAGTTTTGATAATTGCTAATTGTGGATTGAAGGGAATCATACCCCAGTGGTTGAGAGGTTCTACGGAGTTGCAGTTGTTGGATTTGTCTTGGAATCATCTCAGAGGAACTATTCCACCCTGGTTTGGCGAGTTTCCGTCCTTGTTTTACTTGGATTTATCTAATAATTCGTTCACTGGAGATATCCCGAAAGAGATGACTGTAATGAGGAGTTTCATTGACAGAAACTTCTTGCCTGACGAACCTTCCTCCCCAGATTTTTCCCTTTTCGTGAAAAGAAATGGAACTGGATTGCAGTACAATCAAGTATGGAGATTTCCACCCACTTTGAACCTCAGTCTCAACAATCTCAGTGGGCCAATCTGGCCAGAGTTTGGAAATCTTAAGGAGATTCTAGTTCTTGATCTGAAATTCAACAGTTTGTCAGGATCGATTCCGAGCAGCCTCTCTGGGATGGTTAACTTAGAGAATCTGGATCTTTCTCACAACAATCTTTCAGGAATAATTCCACCTTCACTGCAAAATCTCAATTTTTTGTCTAAGTTCAGTGTTGCATACAATCAACTACATGGGGAAATTCCTGAAGGAGGTCAGTTTCATAGCTTTGATAACTCTAGCTTTGAAGGAAATCATTTTTGCTTGCGAGACGATATCTGTACATCAATAGATCCTCTTGTACCATCCAAGAAATCAAGAATGGTTATAGGGACTATTATAGGTATGGTTTTTGGTATTGTATTTGGAATCACGTTTCTTGTAACTCTCATCGTTGTGTTTATTCTTCGGGCACCTCGGGGAAGAGTTGGAGATCCTGAAAACGAAGTGTCTAACACTGACGATAATGACTTGGAGGAAGCCAAGGCAGGATTGGTAGTTTTGTTCCAAAACAATAACAATGGAAGTCTCTCCCTGAATGACATTTTGAAATCGACGAATGACTTTGATCAAGAAAATATCATCGGATGTGGGGGTTTCGGTTTAGTTTACAAAGCCACCCTTCCAGACGGTAGAAAGGTTGCTATAAAACGGTTGTCTGGTGATTGTGGTCAAATGGACCGAGAATTTCGAGCAGAAATCGAAACGCTTTCAGGTGCTCAGCATCCAAATCTTGTTCTTCTTCAGGGGTATTGTATGTATAAAAATGACAGGCTTTTGATATACTCTTACATGGAGAATGGTAGCTTAGATTACTGGTTACATGAAAAACCCGATGGCCCGTCCTGCCTGGACTGGGATACCAGACTGCAGATTGCTCGGGGGGCTGCGGGGGGCCTGGCTTATTTGCATCAATCCTGTGAACCCCATATCCTCCATCGAGATATAAAGTCGAGTAACATTCTTTTAGACAAAAACTTTAAAGCTCACTTAGCCGATTTTGGTCTTGCCAGGCTCATTCTTCCCTATGATTCCCATGTAACGACCGATCTTGTTGGTACATTGGGCTACATTCCACCCGAGTACGGACAATCCTCAGTGGCAACTTACAAAGGGGATGTGTACAGTTTTGGAGTTGTTCTATTAGAGCTTTTGACTGGTAAAAGGCCAATCGATATGTGCAGACCGAAAGGACTTCGAGACCTGATCTCTTGGGTGTTCCAAATGAGGAAAGACAGAAAAGTTAGTGAGGTGTTCGATCCATTAATATACGACAAGCAGCACGAGATAGCGATGACTGAAGTTCTTGATATAGCATGCCTTTGCTTATGTAAGGTACCTAAAGAGAGGCCTTCAACTCAACAGTTAGTTGCTTGGCTAGATAAAGTATGTTAA 3012 42.03 MGVPNFFLILLPVSFFFQFHLSHSQNPTICHSDDSKVLQDFHSAFPSQIYGWHTNCSTNCCTCIGLTCDSSGRLVKMELGGRKLKGQLPNSIARLEHLRVLNLSSNSLTGLVPLALFHLPYLEVLDLSSNEFLGSISPGFINLPSILVLNVSRNSFDGGLPLGVCVNSSRIEILNLGFNNFSGVFPVELAECVSLKRLFVESNFISGGIPDEASGLRRLTHFNVQNNKLSGSLNGVVGNLTSLVRLDLSSNGFSGEIPDVFYNSRNLSHFVAESNRFSGKIPNSLSNSASLTVLNLRNNSIEGTLDLNCSAMKSLVTLDLGTNRFHGSIPSNLPSCTQLRSINLARNNLGGQIPESFRNFQSLSYLSLTNTSIVNVSSALNILQHCQNLSTVVLTFNFRDEVLEDDPNLHFKSLQVLIIANCGLKGIIPQWLRGSTELQLLDLSWNHLRGTIPPWFGEFPSLFYLDLSNNSFTGDIPKEMTVMRSFIDRNFLPDEPSSPDFSLFVKRNGTGLQYNQVWRFPPTLNLSLNNLSGPIWPEFGNLKEILVLDLKFNSLSGSIPSSLSGMVNLENLDLSHNNLSGIIPPSLQNLNFLSKFSVAYNQLHGEIPEGGQFHSFDNSSFEGNHFCLRDDICTSIDPLVPSKKSRMVIGTIIGMVFGIVFGITFLVTLIVVFILRAPRGRVGDPENEVSNTDDNDLEEAKAGLVVLFQNNNNGSLSLNDILKSTNDFDQENIIGCGGFGLVYKATLPDGRKVAIKRLSGDCGQMDREFRAEIETLSGAQHPNLVLLQGYCMYKNDRLLIYSYMENGSLDYWLHEKPDGPSCLDWDTRLQIARGAAGGLAYLHQSCEPHILHRDIKSSNILLDKNFKAHLADFGLARLILPYDSHVTTDLVGTLGYIPPEYGQSSVATYKGDVYSFGVVLLELLTGKRPIDMCRPKGLRDLISWVFQMRKDRKVSEVFDPLIYDKQHEIAMTEVLDIACLCLCKVPKERPSTQQLVAWLDKVC 1003
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24257963 24260974 + Maker00035369 Lcy7g1441 638273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1441 1003 PANTHER LEUCINE RICH REPEAT KINASE 2 381 1000 IPR051420 -
Lcy7g1441 1003 SUPERFAMILY L domain-like 30 232 - -
Lcy7g1441 1003 Pfam Protein kinase domain 729 996 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g1441 1003 SMART LRR_typ_2 566 589 IPR003591 -
Lcy7g1441 1003 SMART LRR_typ_2 312 336 IPR003591 -
Lcy7g1441 1003 SMART LRR_typ_2 95 118 IPR003591 -
Lcy7g1441 1003 SMART LRR_typ_2 119 143 IPR003591 -
Lcy7g1441 1003 SMART LRR_typ_2 216 239 IPR003591 -
Lcy7g1441 1003 SMART LRR_typ_2 240 263 IPR003591 -
Lcy7g1441 1003 Pfam Leucine Rich Repeat 242 263 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 Pfam Leucine Rich Repeat 568 590 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 Pfam Leucine Rich Repeat 338 360 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 Pfam Leucine Rich Repeat 547 566 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy7g1441 1003 ProSiteProfiles Protein kinase domain profile. 728 999 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g1441 1003 SUPERFAMILY Protein kinase-like (PK-like) 714 999 IPR011009 -
Lcy7g1441 1003 SUPERFAMILY RNI-like 167 478 - -
Lcy7g1441 1003 PRINTS Leucine-rich repeat signature 566 579 - -
Lcy7g1441 1003 PRINTS Leucine-rich repeat signature 98 111 - -
Lcy7g1441 1003 Gene3D Transferase(Phosphotransferase) domain 1 804 1002 - -
Lcy7g1441 1003 ProSiteProfiles Leucine-rich repeat profile. 568 591 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 Gene3D Ribonuclease Inhibitor 311 632 IPR032675 -
Lcy7g1441 1003 FunFam Leucine-rich repeat receptor-like protein kinase 804 1003 - -
Lcy7g1441 1003 Gene3D Ribonuclease Inhibitor 31 310 IPR032675 -
Lcy7g1441 1003 FunFam Tyrosine-sulfated glycopeptide receptor 1 309 637 - -
Lcy7g1441 1003 FunFam Leucine-rich repeat receptor protein kinase MSP1 690 803 - -
Lcy7g1441 1003 Pfam Leucine rich repeat 79 131 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 Pfam Leucine rich repeat 413 471 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 164 253 - -
Lcy7g1441 1003 SUPERFAMILY L domain-like 512 627 - -
Lcy7g1441 1003 ProSitePatterns Protein kinases ATP-binding region signature. 734 756 IPR017441 GO:0005524(InterPro)
Lcy7g1441 1003 SMART serkin_6 728 999 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy7g1441 1003 ProSiteProfiles Leucine-rich repeat profile. 97 118 IPR001611 GO:0005515(InterPro)
Lcy7g1441 1003 Gene3D Phosphorylase Kinase; domain 1 688 803 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1098 Lcy-Chr1:10018907 Lcy7g1441 Lcy-Chr7:24257963 4.03E-71 dispersed
Lcy7g1441 Lcy-Chr7:24257963 Lcy7g0396 Lcy-Chr7:3370972 7.47E-77 dispersed
Lcy10g1562 Lcy-Chr10:39972496 Lcy7g1441 Lcy-Chr7:24257963 1.50E-36 transposed
Lcy6g0180 Lcy-Chr6:1630080 Lcy7g1441 Lcy-Chr7:24257963 4.10E-49 transposed
Lcy6g0610 Lcy-Chr6:5821023 Lcy7g1441 Lcy-Chr7:24257963 3.04E-160 transposed
Lcy1g2082 Lcy-Chr1:27892884 Lcy7g1441 Lcy-Chr7:24257963 4.47E-41 wgd
Lcy1g2551 Lcy-Chr1:46483928 Lcy7g1441 Lcy-Chr7:24257963 2.12E-62 wgd
Lcy12g0901 Lcy-Chr12:13013602 Lcy7g1441 Lcy-Chr7:24257963 1.26E-68 wgd
Lcy2g2014 Lcy-Chr2:38132784 Lcy7g1441 Lcy-Chr7:24257963 8.29E-61 wgd
Lcy3g0415 Lcy-Chr3:13866247 Lcy7g1441 Lcy-Chr7:24257963 2.50E-56 wgd
Lcy7g1441 Lcy-Chr7:24257963 Lcy9g0626 Lcy-Chr9:20737737 2.87E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66089 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1441 K27625 - csv:116404121 1650.57