Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy7g1942 ATGAGTTGTTCTTTTCCTCCTTGGTTTAGTCGTTTTATTGACTTTGGTATGTCGATCCTTTCCCCCTTCCCCATCACCGGCAGAGCACCATCAGTTTCTGCAATTTTCTCCCACATGGATCTCTCCAACATTGCTCGCAAGCTCGATCTTTCCGACTCAGAAACCCTCATCCGAAAAGCTGGGGAGTTTCGTCGCCTCTCTGATCTTCATTTCAATTCTTCCGTTATTGGAGTTGGGGAGGTTTGCAAGGCCATAATCTGTTTGGAAATCGCTGCTACAAGATTAGGGATTTTATTTGATAGATCAAGTGCAATCAAATTAAGCGGGATGTCGGAGAAGGCTTACACAAGATCTTACAATTTGTTGCAGAATGGTCTTGGTTTCAAAAGTAGGCTTGATATTAGAGAACTGGCAGTGCAGTTTGGGTGTGTTAGACTGGTTGCTTCAGTCCAAAAGGGATTATCTCTATACAAGGATCGGTTTGTTGCATCACTGCCAGCTTCTCGACGGGCGAGTGCTGACTTCTCCCGATCAGTATTTACAGCTGTAGCCTTCTACTTGTGTGCAAAAAAGCACAAGCTAAAGGTTGACAAAGTTAAGCTCATTGAACTCAGTGGTACATCTGAATCTGAATTCTCATGTATTGCTACTTCTATGAAGGACTTGTGCTTCGATGTCTTTGGGGTTTCTAGTGAAAAGAAAGATCCTAGAGATGCCAAAGGGAACAGAGACCTACTAGATGCATTGCCAGAGAAAAGGAAGCTTGAGGATGGCGGTTATTTATCTGATGATGGCGAAGAGTTTCCAAGATCAAAACGTTGCAAGCCAATGGCTAAACAAGCCTATAATCAGTGGAAATCCTCTGTCATTGCTTCCAATAACTTGACAAGGACAAAAGTTCTTGGCAAGCGAACCAGGCAAACTTCCCTTCACGTTTTCAAGGAAAAGAAAGAAATAGATGATAAATAG 969 42.83 MSCSFPPWFSRFIDFGMSILSPFPITGRAPSVSAIFSHMDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIICLEIAATRLGILFDRSSAIKLSGMSEKAYTRSYNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYKDRFVASLPASRRASADFSRSVFTAVAFYLCAKKHKLKVDKVKLIELSGTSESEFSCIATSMKDLCFDVFGVSSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEEFPRSKRCKPMAKQAYNQWKSSVIASNNLTRTKVLGKRTRQTSLHVFKEKKEIDDK 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 45702871 45705736 - Maker00034676 Lcy7g1942 638774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy7g1942 322 Gene3D - 129 226 - -
Lcy7g1942 322 Pfam ORC6 second cyclin-like domain 132 222 IPR054113 -
Lcy7g1942 322 CDD Orc6_mid 130 226 - -
Lcy7g1942 322 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 39 299 IPR020529 GO:0005664(PANTHER)|GO:0005664(InterPro)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Lcy7g1942 322 Pfam Origin recognition complex subunit 6 (ORC6) 41 129 IPR008721 GO:0003677(InterPro)|GO:0005664(InterPro)|GO:0006260(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g1942 Lcy-Chr7:45702871 Lcy8g0029 Lcy-Chr8:1000228 8.52E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy7g1942 K02608 - csv:101204841 496.123