Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0029 ATGGATCTCTCCAACATTGCTCGCAAGCTCGATCTTTCCGACTCCGAAACCCTCATCCGAAAAGCTGGGGAGTTTCGTCGCCTCTCCGATCTCCATTTCAATTCTTCCGTTATTGGAGTTGGGGAAGTTTGCAAGGCCATAATCTATTTGGAAATCGCCGCTACAAGATCAAGTGCAATCAAATTAAGCGGGATGTCGGAGAAGGCTTACACCAGATCTTTCAATTTGTTGCAGAATGGTCTTGGTTTCAAAAGTAGGCTTGATATTAGAGAACTAGCAGTGCAGTTTGGGTGTGTTAGGCTGGTTGCTTCAGTCCAAAAGGGATTATCTCTATACAAGGATCGGTTTGTTGCATCACCAGCTTCTCGACGGGTGAGTGCTGACTTCTCTCGATCATTATTTATAGTTGTAGCCTTCTACTTGTGTGCGAAAAAGCACAAGCTTAAGGTTGACAAAGTTAAGCTCATTGAACTCAATGGTACATCTGAATCTGAATTCTCATGTATCACTACTTCTATGAAGGACTTGTGCTTTGATGTCTTTGGGATTTCTAGTGAAAAGAAAGATCCTAGAGATGCCAAAGGGAACAGAGACCTACTTGACGCATTGCCAGAGAAAAGGAAACTTGAGGATGGCGGTTATTTATCTGATGATGGCGAAGAGTTATCAAGTAGCTGCATCCCGAGTACTTGA 693 43.29 MDLSNIARKLDLSDSETLIRKAGEFRRLSDLHFNSSVIGVGEVCKAIIYLEIAATRSSAIKLSGMSEKAYTRSFNLLQNGLGFKSRLDIRELAVQFGCVRLVASVQKGLSLYKDRFVASPASRRVSADFSRSLFIVVAFYLCAKKHKLKVDKVKLIELNGTSESEFSCITTSMKDLCFDVFGISSEKKDPRDAKGNRDLLDALPEKRKLEDGGYLSDDGEELSSSCIPST 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1000228 1003068 + Maker00037368 Lcy8g0029 638921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0029 230 Pfam Origin recognition complex subunit 6 (ORC6) 3 84 IPR008721 GO:0003677(InterPro)|GO:0005664(InterPro)|GO:0006260(InterPro)
Lcy8g0029 230 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 224 IPR020529 GO:0005664(PANTHER)|GO:0005664(InterPro)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Lcy8g0029 230 Pfam ORC6 second cyclin-like domain 87 176 IPR054113 -
Lcy8g0029 230 Gene3D - 84 180 - -
Lcy8g0029 230 CDD Orc6_mid 85 180 - -
Lcy8g0029 230 MobiDBLite consensus disorder prediction 210 230 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g1942 Lcy-Chr7:45702871 Lcy8g0029 Lcy-Chr8:1000228 8.52E-142 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0029 K02608 - csv:101204841 373.629