Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0100 ATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAACTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTACCTTCGAAGCTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGCATCCATTGATGGCACTCGCATTATTGGCCGCCTATGTGCTGAACTCCAGCACTTGAGAAACAGCCTACCTGATCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTTGCTGGTAACGTCCTCGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCTCATACGTCTATCGAAGATTTGGACGAGCTATCGACTCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGCGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCGGACACCACTGCCACAGAACTATCAGTAATTGAGAGCGTTTTCAAATTGAGAGAGGCTCAACCAAGTTCCATTGTTGACGAGATGAGGAAGTCGCTAATAGACAGTTACGTGTGA 693 46.03 MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFEAELGGVIPVVKASIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSYV 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2318332 2321686 + Maker00026502 Lcy8g0100 638992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0100 230 FunFam Eukaryotic translation initiation factor 6 1 210 - -
Lcy8g0100 230 NCBIfam translation initiation factor IF-6 4 209 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lcy8g0100 230 Pfam eIF-6 family 4 188 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lcy8g0100 230 PIRSF Transl_init_IF-6 1 211 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lcy8g0100 230 Hamap Translation initiation factor 6 [eif6]. 1 230 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lcy8g0100 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 229 IPR002769 GO:0000054(PANTHER)|GO:0000460(PANTHER)|GO:0000470(PANTHER)|GO:0005730(PANTHER)|GO:0005829(PANTHER)|GO:0030687(PANTHER)|GO:0042256(InterPro)|GO:0043022(InterPro)|GO:0043023(PANTHER)|GO:1902626(PANTHER)
Lcy8g0100 230 Gene3D - 1 210 - -
Lcy8g0100 230 SUPERFAMILY Pentein 1 209 - -
Lcy8g0100 230 CDD IF6 2 208 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Lcy8g0100 230 SMART eIF6neu2 3 189 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0100 K03264 - csv:101212091 420.624