Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0111 | AAGAAAGACTTGAAGGGTTCTCCAATGGAGGCAACAGGGGTTGTACATGAACCTCCCAATGCCAAGTTTGAGTTCACTCCAACATGGATTGTTGCTGTTGTTTCATCCATTATTGTTATCATTTCCTTCTCTGTTGAACGTGGCCTTCATCACCTTGGAAAGTGGTTGAAACATAAAAAGAAGAATCAACTGAATCATGCCTTGCTGAAACTAAAGGAAGAGTTGATGATTTTAGGGTTTATCTCCCTATTATTGAATGTGTTTCAAGGAGCAATTGGACGTTTCTGTATGCCCAAAGATTTTGCAAACCATATGCTTCCATGCAAGAGAACTGCACCAGTTGTTAACCATTTCTCAACTTCTACTTTCATTGATCACTATAATAATATTCACCGTCATCTATTGTCCGCTCAAATTAATTTTCAACATTGCTCACGAAAAGGCAAGGTTCCTCTTTTGTCGTTGGAAGCTCTGCATCAGCTGCATATTTTCATATTTGTGTTGGCTGTTGTTCATGTCATCTTCTGCGCTACAACCATGCTTCTAGCTGCTGCAAAGGTCAACTCATCTTCCCCCTCCCCCCTCCCTCCTGACTACTTCTTCAAGGCTCACAGATTTCTTTGTTCGGTATCCGAGGATTCTACAAAATGGCTAAGTTAG | 660 | 40.91 | KKDLKGSPMEATGVVHEPPNAKFEFTPTWIVAVVSSIIVIISFSVERGLHHLGKWLKHKKKNQLNHALLKLKEELMILGFISLLLNVFQGAIGRFCMPKDFANHMLPCKRTAPVVNHFSTSTFIDHYNNIHRHLLSAQINFQHCSRKGKVPLLSLEALHQLHIFIFVLAVVHVIFCATTMLLAAAKVNSSSPSPLPPDYFFKAHRFLCSVSEDSTKWLS | 219 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 2592769 | 2597349 | - | Maker00027287 | Lcy8g0111 | 639003 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0111 | 219 | PANTHER | MLO-LIKE PROTEIN 1 | 20 | 189 | IPR004326 | GO:0006952(InterPro)|GO:0016020(InterPro) | |
| Lcy8g0111 | 219 | Pfam | Mlo family | 22 | 188 | IPR004326 | GO:0006952(InterPro)|GO:0016020(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy8g0111 | Lcy-Chr8:2592769 | Lcy8g1891 | Lcy-Chr8:45201927 | 6.47E-34 | dispersed | |
| Lcy11g0297 | Lcy-Chr11:4760616 | Lcy8g0111 | Lcy-Chr8:2592769 | 1.12E-31 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0111 | K08472 | - | csv:101216903 | 264.618 |