Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy8g0116 | ATGCTACTCCAAATAAGGGAAATATTTTGCACACGATTTGGAAAGAATTTGATTGGAAATTGGGATAGCGTCGAGACACTATCTCTTGTGTTCACGGCGTTGAGCAATAGTGTCAAGCAACGTCTTGACGCTTATGCTACTATCTTCAACTTTAGCCATGTGATGTGGGACAACTACCTGTGGGCTGAAATTGCGTCGTCTCGGTTGAAGCTCTACTCGTACTGGAGAAGCACTTGTTCTCATCGTGTTCGAATTGCCCTCCATCTGGAAGGGCTAAACTATGAGTACAAAGCTGTTGACCTAGTAAAGGGAGAGCATTTCTGTTCTGAATATGAAAAGCTCAATCCTATCGGTTACGTACCGACTCTCGTCGATGGGGATGTTGTTGTTGCAGACTCTTTTGCTATAATAATGTATTTGGATGAAAAGTATCCTCAACATCCTCTTCTGCCTCGTGATCTTCATAAAAGGGCTATTAATTACCAGGCTGCAAATATTGTTTCTTCAAGCATACAGCCTCTTCAAAATCTAGCTGTTGTGAAATACATAGAGGAAAAATCTGGTCCAGAGGAGAAACTTGCTTGGGTTCAACATCACATTGGAAAAGGTTTTGCAGGTAAGTTTGAGTTGAGATGA | 636 | 41.67 | MLLQIREIFCTRFGKNLIGNWDSVETLSLVFTALSNSVKQRLDAYATIFNFSHVMWDNYLWAEIASSRLKLYSYWRSTCSHRVRIALHLEGLNYEYKAVDLVKGEHFCSEYEKLNPIGYVPTLVDGDVVVADSFAIIMYLDEKYPQHPLLPRDLHKRAINYQAANIVSSSIQPLQNLAVVKYIEEKSGPEEKLAWVQHHIGKGFAGKFELR | 211 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2716886 | 2721580 | + | Maker00027197 | Lcy8g0116 | 639008 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy8g0116 | 211 | SFLD | Glutathione Transferase (cytosolic) | 69 | 183 | IPR040079 | - | |
Lcy8g0116 | 211 | Gene3D | - | 152 | 209 | - | - | |
Lcy8g0116 | 211 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 67 | 148 | IPR004045 | - | |
Lcy8g0116 | 211 | CDD | GST_N_Zeta | 69 | 141 | IPR034333 | - | |
Lcy8g0116 | 211 | PANTHER | MALEYLACETOACETATE ISOMERASE | 67 | 205 | - | GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER) | |
Lcy8g0116 | 211 | NCBIfam | maleylacetoacetate isomerase | 70 | 206 | IPR005955 | GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro) | |
Lcy8g0116 | 211 | Pfam | Glutathione S-transferase, N-terminal domain | 68 | 142 | IPR004045 | - | |
Lcy8g0116 | 211 | SFLD | Main (cytGST) | 69 | 183 | - | - | |
Lcy8g0116 | 211 | FunFam | Glutathione S-transferase Z1 | 67 | 151 | - | - | |
Lcy8g0116 | 211 | SUPERFAMILY | GST C-terminal domain-like | 148 | 205 | IPR036282 | - | |
Lcy8g0116 | 211 | SUPERFAMILY | Thioredoxin-like | 60 | 152 | IPR036249 | - | |
Lcy8g0116 | 211 | Gene3D | Glutaredoxin | 66 | 151 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy7g0233 | Lcy-Chr7:2040262 | Lcy8g0116 | Lcy-Chr8:2716886 | 4.97E-08 | dispersed | |
Lcy8g0116 | Lcy-Chr8:2716886 | Lcy11g1731 | Lcy-Chr11:41137837 | 2.29E-10 | dispersed | |
Lcy8g0114 | Lcy-Chr8:2633101 | Lcy8g0116 | Lcy-Chr8:2716886 | 2.71E-76 | proximal | |
Lcy8g0116 | Lcy-Chr8:2716886 | Lcy8g0117 | Lcy-Chr8:2796833 | 7.16E-84 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy8g0116 | K01800 | - | csv:101213302 | 242.662 |