Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy8g0117 | ATGGCTGAAAATATGGCGTCGCCGGTCGCAGCTTCTCCGTTGAAGCTTTACTCGTACTGGAGGAGCTCTTGTTCTCACCGCGTTCGAATTGCTCTAAACTTGAAAGGGTTAAATTTCGAATACAAAGCTGTTAACCTTCTCAAGGGAGAGCAATTCACTCCCGAATACGAAAAGCTCAATCCTATCGGTTATGTACCTACTCTCGTGGATGGAGATATTGTTATTGCCGACTCTTTTGCTATATTAATGTATTTGGAGGAGAAGTATCCTCAGAATCCTCTGTTGCCTCGTGATCTTGGTAAAAGAGCTGTTAATTATCAGGCTGCAAACATCGTTTCTTCTAGCATACAGCCTCTTCAAAATTTAGCTGTTCTGAAGTACGTTGAGGAAAAATCTGGTCCAGAGGAGAAACTTCGTTGGGTTCGACATCACATTGAAAAAGGCTTTACAGCAATTGAAAAGCTGCTAAAAGCTCATGCTGGAAAATTTGCTACTGGAGACGAAATCTTTCTGGCAGACTTGTTTCTGGCTCCTCAAATTCATGGCGCCATTAATAGATTCAGTGTTGACATGGTATTACTGATTCTTCAAATTTCATGTGCTGGTTGTAAATTAGAGCTTAATTGTGTCATTGGTCTGCAAAGCTTTGTTAATGATATAACAAGTACTATTACACTGTCACTCTGTTGTTTTTACTATCAATATTCTTTGCAGTCCAAATTTCCACTTTTGTCCAGGTTGAATGAGGAATACAATGCTATACCAGCATTTCAAGATGCAGCGCCAGCAAAGCAGCCTGATGCTCCTCAAAGCTCTAGCTAA | 822 | 40.63 | MAENMASPVAASPLKLYSYWRSSCSHRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDIVIADSFAILMYLEEKYPQNPLLPRDLGKRAVNYQAANIVSSSIQPLQNLAVLKYVEEKSGPEEKLRWVRHHIEKGFTAIEKLLKAHAGKFATGDEIFLADLFLAPQIHGAINRFSVDMVLLILQISCAGCKLELNCVIGLQSFVNDITSTITLSLCCFYYQYSLQSKFPLLSRLNEEYNAIPAFQDAAPAKQPDAPQSSS | 273 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 2796833 | 2801349 | + | Maker00027202 | Lcy8g0117 | 639009 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy8g0117 | 273 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 98 | 270 | IPR010987 | - | |
Lcy8g0117 | 273 | SFLD | Glutathione Transferase (cytosolic) | 14 | 183 | IPR040079 | - | |
Lcy8g0117 | 273 | Gene3D | Glutaredoxin | 12 | 96 | - | - | |
Lcy8g0117 | 273 | Gene3D | - | 232 | 273 | - | - | |
Lcy8g0117 | 273 | SFLD | Main (cytGST) | 14 | 183 | - | - | |
Lcy8g0117 | 273 | FunFam | Glutathione S-transferase Z1 | 12 | 96 | - | - | |
Lcy8g0117 | 273 | SUPERFAMILY | GST C-terminal domain-like | 93 | 191 | IPR036282 | - | |
Lcy8g0117 | 273 | CDD | GST_N_Zeta | 14 | 86 | IPR034333 | - | |
Lcy8g0117 | 273 | Gene3D | - | 97 | 194 | - | - | |
Lcy8g0117 | 273 | CDD | GST_C_Zeta | 101 | 265 | IPR034330 | - | |
Lcy8g0117 | 273 | PANTHER | MALEYLACETOACETATE ISOMERASE | 13 | 268 | - | GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER) | |
Lcy8g0117 | 273 | Pfam | Glutathione S-transferase, N-terminal domain | 12 | 86 | IPR004045 | - | |
Lcy8g0117 | 273 | NCBIfam | maleylacetoacetate isomerase | 15 | 191 | IPR005955 | GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro) | |
Lcy8g0117 | 273 | SUPERFAMILY | Thioredoxin-like | 8 | 97 | IPR036249 | - | |
Lcy8g0117 | 273 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 12 | 93 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g1895 | Lcy-Chr11:42659106 | Lcy8g0117 | Lcy-Chr8:2796833 | 3.78E-23 | dispersed | |
Lcy8g0114 | Lcy-Chr8:2633101 | Lcy8g0117 | Lcy-Chr8:2796833 | 8.74E-111 | dispersed | |
Lcy8g0117 | Lcy-Chr8:2796833 | Lcy11g1731 | Lcy-Chr11:41137837 | 8.44E-10 | dispersed | |
Lcy8g0116 | Lcy-Chr8:2716886 | Lcy8g0117 | Lcy-Chr8:2796833 | 7.16E-84 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy8g0117 | K01800 | - | csv:101213302 | 346.665 |