Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy8g0233 | ATGGCGAAATCACCAGAAGATGAACATCCAAACAAGGCTTTTGGTTGGGCTGCCCGAGATACTTCCGGCTTACTCTCTCCCTTTCATTTCTCTCGAAGGGAAAATGGTGATGATGATGTCAGCATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTGCACTTGCTCAAGAATGATTGGGGTGTCACAAGTTATCCAATAGTCCCAGGGCATGAGATTGTTGGTGTAGTAACTTCTGTTGGGAATAATGTGAAGAAATTCAAAGCGGGCGACCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAAAAGTTGTGAAAGTTGTGAACAGGACTTGGAGAATTACTGCCCCAAGATGATATTTACTTACAACTCACATTCATATGATGGAGCAAAGACTTACGGTGGTTATTCCGATAAGATCGTCGTCGATCAGCATTTCGTGCTTCGATTTCCTGACAACTTACCCCTTGATGCTGGAGCTCCACTTCTATGCGCTGGAATCACAATTTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGCAAGGCATTTGGCTTGAAAGTTACTGTCATCAGTACCTCTCCAAGAAAGAAGGAGGAAGCTATCGATAGGCTCGGTGCAGACGCATTCCTTGTTTCGAGTGATCCTGCACAATTGAAGCTATATGTCATGCTTGATTCTGAGCAGGCTTCCATGGGGACAATGGATTACATCATCGACACAGTATCAGCTATCCATGCTCTTGCTCCACTGCTTGGTCTGCTAAAACTCAATGGAAAGTTGGTCACTGTGGGTTTACCTAACAAGCCACTCGATCTGCCAATTGCTTCTCTAGTTATCGGTAGGAAGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAAATGTTGGATTTCTGTGCTAAACACAACATCACAGCAGAGATTGAGCTCATTCAGATGGACGACATTAACACGGCCATCGAAAGGCTTGCGAAAGCGGATGTTCGATATCGGTTTGTGATCGACATTGGAAACTCCTTGAAATAG | 1104 | 44.66 | MAKSPEDEHPNKAFGWAARDTSGLLSPFHFSRRENGDDDVSIKVLYCGVCHSDLHLLKNDWGVTSYPIVPGHEIVGVVTSVGNNVKKFKAGDQVGVGVIVGSCKSCESCEQDLENYCPKMIFTYNSHSYDGAKTYGGYSDKIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFLVSSDPAQLKLYVMLDSEQASMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLDLPIASLVIGRKMVGGSNFGGLKETQEMLDFCAKHNITAEIELIQMDDINTAIERLAKADVRYRFVIDIGNSLK | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6209097 | 6211915 | + | Maker00027228 | Lcy8g0233 | 639125 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy8g0233 | 367 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 71 | 85 | IPR002328 | GO:0008270(InterPro)|GO:0016491(InterPro) | |
Lcy8g0233 | 367 | PANTHER | ALDEHYDE REDUCTASE | 5 | 365 | IPR047109 | GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER) | |
Lcy8g0233 | 367 | FunFam | probable cinnamyl alcohol dehydrogenase | 16 | 176 | - | - | |
Lcy8g0233 | 367 | Gene3D | - | 167 | 332 | - | - | |
Lcy8g0233 | 367 | FunFam | Cinnamyl alcohol dehydrogenase | 167 | 332 | - | - | |
Lcy8g0233 | 367 | Gene3D | - | 16 | 362 | - | - | |
Lcy8g0233 | 367 | CDD | CAD1 | 14 | 361 | IPR047109 | GO:0016616(InterPro) | |
Lcy8g0233 | 367 | SMART | PKS_ER_names_mod | 23 | 360 | IPR020843 | GO:0016491(InterPro) | |
Lcy8g0233 | 367 | Pfam | Alcohol dehydrogenase GroES-like domain | 36 | 154 | IPR013154 | - | |
Lcy8g0233 | 367 | Pfam | Zinc-binding dehydrogenase | 194 | 326 | IPR013149 | - | |
Lcy8g0233 | 367 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 156 | 330 | IPR036291 | - | |
Lcy8g0233 | 367 | SUPERFAMILY | GroES-like | 22 | 185 | IPR011032 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy12g1474 | Lcy-Chr12:33560678 | Lcy8g0233 | Lcy-Chr8:6209097 | 1.95E-120 | dispersed | |
Lcy1g0846 | Lcy-Chr1:7236350 | Lcy8g0233 | Lcy-Chr8:6209097 | 1.21E-181 | dispersed | |
Lcy1g0847 | Lcy-Chr1:7242689 | Lcy8g0233 | Lcy-Chr8:6209097 | 2.32E-179 | dispersed | |
Lcy4g0213 | Lcy-Chr4:2669396 | Lcy8g0233 | Lcy-Chr8:6209097 | 4.90E-127 | dispersed | |
Lcy6g0498 | Lcy-Chr6:4673450 | Lcy8g0233 | Lcy-Chr8:6209097 | 2.94E-124 | dispersed | |
Lcy8g0232 | Lcy-Chr8:6158046 | Lcy8g0233 | Lcy-Chr8:6209097 | 6.22E-183 | tandem | |
Lcy9g2283 | Lcy-Chr9:47268657 | Lcy8g0233 | Lcy-Chr8:6209097 | 4.30E-140 | transposed | |
Lcy6g1415 | Lcy-Chr6:21068207 | Lcy8g0233 | Lcy-Chr8:6209097 | 1.60E-16 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy8g0233 | K00083 | - | csv:101205228 | 587.8 |