Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0278 ATGGAGCTGGGTTTCGTTACATCGAAAGACAACACCTGGTGGGTCTTTACACTCCCTTATCTTCTTGGTTCGGAAAACCTTGATTGTTGTCTCATTCTTCTGTTGGCTTTTCTTTCTCTTGCCCTTCTTTCTTGGGCTTTTGCCGTCGGTGGCACTGCTTGGAGAAATGGAAGGAATGAAAGAGGTCGAGTTCCCATTCCCGGCCCTCGCGCCCTTCCAATTCTCGGCAGTTTGTTCACTCTCAGTCGTGGCTTACCCCACCGGACTCTCGCTGCCATGGCAGCTGCCCGAGGTAACTCTAAGCTAATGGCCTTCAGTCTCGGCTCCACCCCTGTTGTCGTGGCTTCCGACCCAAATACGGCCAAGGAAATTTTAACCTCGCCCCACTTCGCCGACCGCCCTTTAAAGCAGTCCGCCAAAAGCCTAATGTTCGGTCGAGCCATAGGGTTCGCACCAAACGGCACCTACTGGCGCCTCCTCAGAAGAATCGCCTCTTCACACCTCTTCTCTCCAAGGCGTATTGCAGCCCACGAAGGCGCTCGCCAGCTCGAATGCGCCGCTATGCTGCAAAGCATTCACAACGACCAAACCCTCCACGGAACCGTTTCTCTGAAGAAGCACCTTCAAGCAGCCGCCTTGAACAACATCATGTGGAGTGTCTTCGGGAAGCGCTTCGACCCGGCCGACTCGAAGTTAGAAGCGCTTCGGGATTTGGTCCGAGAAGGGTTCGAGCTGTTGGGTGCCTTCAACTGGTCCGATCATCTCCCATGGCTTAGTTGGTTCTACGACCCGTGTCGTATTAACCAGCGCTGCGCCAAACTCGTCCCCAAAGTTACCAAATTCGTCGGAGACGTAATTAATGAGCACCGTCGGCCTAAAACCCTGTCGGATGATTCCGATTTTGTTGACGTTTTGCTCTCTCTCGATGGCGACGAAAAGCTCAACGATGATGACATGGTCGCTGTTTTATGGGAAATGATATTCAGAGGGACGGATACGACAGCGCTGCTTACAGAGTGGGTGATGGCGGAGTTAGTTTTGCACCGTGAGGTACAGGAAGAACTTGGGAGGGAAATCGAGAGGGCTGTGGGCGGTGACGGAAGAACCCTCACAGACGCCGACGTGGCTAACCTGCCTTACTTACAGGCGGTGGTGAAGGAGACACTGCGGCTGCACCCACCGGGTCCACTTCTCTCGTGGGCCCGCCTCTCTTCGTCGGACGTCCAGCTCAGCAACGGCATGCTTATCCCTGAGAACACAACCGCCATGGTCAATATGTGGGCCATCACACACGATCCGCACGTATGGGAGGATCCACACGTGTTCAACCCGGGGAGGTTCGTGGGCGCCGACGTGGACGTCAGGGGCAGCGACCTCCGCCTGGCGCCCTTTGGGGCTGGACGGAGGGTCTGCCCGGGAAAGAACCTCGGCCTTGTCACTGTCACGCTTTGGGTCGCTAAGCTGGTCCATCACTTCAAATGGGCCCCCGACCCGGCCCACCCTGTGGACCTCACCGAACTCCTCAAGCTCTCCTGCGAGATGAAGAATCCTCTACGTGCAGTCGCAGTGCAAAGACGTGGACTTTAG 1587 55.95 MELGFVTSKDNTWWVFTLPYLLGSENLDCCLILLLAFLSLALLSWAFAVGGTAWRNGRNERGRVPIPGPRALPILGSLFTLSRGLPHRTLAAMAAARGNSKLMAFSLGSTPVVVASDPNTAKEILTSPHFADRPLKQSAKSLMFGRAIGFAPNGTYWRLLRRIASSHLFSPRRIAAHEGARQLECAAMLQSIHNDQTLHGTVSLKKHLQAAALNNIMWSVFGKRFDPADSKLEALRDLVREGFELLGAFNWSDHLPWLSWFYDPCRINQRCAKLVPKVTKFVGDVINEHRRPKTLSDDSDFVDVLLSLDGDEKLNDDDMVAVLWEMIFRGTDTTALLTEWVMAELVLHREVQEELGREIERAVGGDGRTLTDADVANLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPENTTAMVNMWAITHDPHVWEDPHVFNPGRFVGADVDVRGSDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWAPDPAHPVDLTELLKLSCEMKNPLRAVAVQRRGL 528
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 8225270 8227292 + Maker00026982 Lcy8g0278 639170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0278 528 Pfam Cytochrome P450 67 502 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PANTHER CYTOCHROME P450 78A7-RELATED 6 521 IPR051996 -
Lcy8g0278 528 SUPERFAMILY Cytochrome P450 66 525 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 Gene3D Cytochrome P450 53 526 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 FunFam Cytochrome P450 78A5 58 525 - -
Lcy8g0278 528 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0278 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0278 528 CDD CYP78 98 518 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0047 Lcy-Chr7:363829 Lcy8g0278 Lcy-Chr8:8225270 1.51E-158 dispersed
Lcy8g0278 Lcy-Chr8:8225270 Lcy1g0748 Lcy-Chr1:6421440 5.70E-75 dispersed
Lcy8g0975 Lcy-Chr8:34377657 Lcy8g0278 Lcy-Chr8:8225270 6.34E-48 dispersed
Lcy1g1999 Lcy-Chr1:25181923 Lcy8g0278 Lcy-Chr8:8225270 9.62E-67 wgd
Lcy6g1734 Lcy-Chr6:34142993 Lcy8g0278 Lcy-Chr8:8225270 4.19E-67 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0278 K20619 - csv:101214099 850.892