Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0844 ATGGATTTTGATCTTTTCCTTTGCATTTCGCTCTCTCTTATCTCTATCCTTCTTGGCTACACCTTTCTATGGCAACCTCATCGCAGAAACCTCCCACCAACCCCACCTTTTTCTCTTCCATTCATAGGCCATCTCCATCTCCTCAAACATCCCGTCCACCAAACACTGGCCAAACTCTCACAAAACCTTGGCCAAGTCTTCTCTCTCCGATTCGGCTCACGTCTTGTCGTCGTTGTATCTTCTCCTTCTGCCGTGCACGAATGCTTCACAAAGAACGATATCATTCTCGCAAATCGGCCACTCTTGAACACTGGAAAGTACTTAGCACACAACAATTCCACCATGGTGGTCGCTCCCTACGGCGACCATTGGCGAAACCTCCGCCGAATCAGCGCCCTCGAGATTTTCTCAACCACCCGCCTTAATTCCTTCTTGGGTATTCGTGAAGATGAGGTCAAGCGTTTGCTGTGCAATCTATGTGGTGATGATTCCTTGGAAGAGTTCAGGGTGGTGGAGTTGGAGCCGATGCTGTTGGATCTTACGTTCAATATTGTTATGAGGATGGTGGCTGGAAAGAAGTTTTATGGAGAGGACGTGTTGGATGAGGGATATTCTAAAAGATTTAGAGAGTTGGTGACGCAGATTATGGCACATGGTGGGTCAACGAATCCAGGTGACTTCATACCCTTGTGGAATTGGATTGATCCAACTGGTTTTGAGAAGAGGATAATGAAGCTTGGACGGAGAGCTGATGAACTCCTTCAAGAATTAGTTGATGAAATTCGAATTAAAAATGATGGAGGAAACACTATGATTGACCATTTACTTCGCTTGCAAAACACAGAACCTGAATATTATAGTGACCAAGTTATCAAAGGTCTCATACAAGATATATTCTTAGCAGGGATTGACTCAACTGCTGTGACCTTAGAATGGGCACTGTCTCATTTACTTAACAACCCGGACGTCTTAAAGAGGGCCACTGCTGAGATAGATTGTTTGATTGGACAAGAGGATATGGTTAATGAAGTTCATTTGTCGAGTTTGAGCTACTTGCAAGGAATTATCTCTGAGACTCTACGGCTAAGTCCGGCTGGTCCTTTGCTTGTACCACATTGTGCATCTAAAGATTGTAAAATACAAGGCTATGATGTTCCACGTGATACAATTGTGATGATTAATGCTTGGGCTATACATCGAGATCCGAATCTATGGGAAGATGCCACTAGATTTAAGCCTGAAAGACATGTAAATGTGATTGGATTTGACTCATACAAACTATTACCATTTGGTTTGGGGAGGAGAGCATGTCCTGGTATGGGGATGGCGCAACGAGTGGTTGGCTTGACTTTGGCATCGCTGATTCAATGCTTTGAATGGAAAAGAATGAGCAACTTATTGGTTGACATGACGGAAGGTAAAGGGCTCACTATGCCCAAAGCTGAATCATTAGTGGCCAAGTGTAGACCGCGCCCTATAATGAAAGCTATTCTTAGCAAATCAACTGCCCATATTTGA 1518 44.01 MDFDLFLCISLSLISILLGYTFLWQPHRRNLPPTPPFSLPFIGHLHLLKHPVHQTLAKLSQNLGQVFSLRFGSRLVVVVSSPSAVHECFTKNDIILANRPLLNTGKYLAHNNSTMVVAPYGDHWRNLRRISALEIFSTTRLNSFLGIREDEVKRLLCNLCGDDSLEEFRVVELEPMLLDLTFNIVMRMVAGKKFYGEDVLDEGYSKRFRELVTQIMAHGGSTNPGDFIPLWNWIDPTGFEKRIMKLGRRADELLQELVDEIRIKNDGGNTMIDHLLRLQNTEPEYYSDQVIKGLIQDIFLAGIDSTAVTLEWALSHLLNNPDVLKRATAEIDCLIGQEDMVNEVHLSSLSYLQGIISETLRLSPAGPLLVPHCASKDCKIQGYDVPRDTIVMINAWAIHRDPNLWEDATRFKPERHVNVIGFDSYKLLPFGLGRRACPGMGMAQRVVGLTLASLIQCFEWKRMSNLLVDMTEGKGLTMPKAESLVAKCRPRPIMKAILSKSTAHI 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 30430463 30432380 - Maker00031238 Lcy8g0844 639736
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0844 505 Gene3D Cytochrome P450 24 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 SUPERFAMILY Cytochrome P450 32 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 CDD CYP81 64 484 - -
Lcy8g0844 505 FunFam Cytochrome P450 family protein 24 494 - -
Lcy8g0844 505 PANTHER CYTOCHROME P450 82C3-RELATED 18 491 IPR050651 -
Lcy8g0844 505 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0844 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0844 505 Pfam Cytochrome P450 33 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g0844 Lcy-Chr8:30430463 Lcy8g0847 Lcy-Chr8:30592081 1.64E-296 dispersed
Lcy8g0844 Lcy-Chr8:30430463 Lcy8g0846 Lcy-Chr8:30508446 6.57E-278 proximal
Lcy1g1999 Lcy-Chr1:25181923 Lcy8g0844 Lcy-Chr8:30430463 2.44E-90 wgd
Lcy10g0976 Lcy-Chr10:31318685 Lcy8g0844 Lcy-Chr8:30430463 4.77E-66 wgd
Lcy13g1061 Lcy-Chr13:23713799 Lcy8g0844 Lcy-Chr8:30430463 3.42E-11 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0844 K13260 - csv:101205626 789.26