Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0846 | ATGGATATTCTTTTGCTTTCCATTTCTGTCTTTCTATTTTCTCTCCTTCTTGCCTTCAACTTTCTGCTGCGACCTCATCGCTTGAACCTCCCACCAACCCCACCTTTTTCCCTTCCACTAATAGGCCATCTCCATCTCCTCAAACACCCTCTCCATCGAACACTTCACAAACTCTCCCAAAAATATGGCCATCTCTTCTCTCTTCGATTTGGTTCACGTCTTGTCGTCATCGTATCATCTCCTTCTGCCGTGCACGAATGCCTTTCAAAGAACGACATCGTTCTTGCAAATCGGCCATTGTTGAACACCGGAAAGCACTTGGCATACAACCACACCACCATGGCGGCCTCCCCTTATGGTGACCATTGGCGAAACCTCCGCCGCATTGCCTCCCTCGAGATCTTCTCAACAAGCCGCCTCAATTTGTTCTTGGGAATTCGAGAACATGAAGTCAAACGTTTACTGTGTAAATTATGTCATGATTCGTGGGAAGAGTTTAGGCTCGTGGAATTGGAGCCGATGTTGTTTGATCTTATGTTCAATATTATTATGAGAATGATGGTTGGAAATAAGTTTAATAGTGAGGACGACGGAAATTCTGAGGGATTCAAAGAGTTGGTGACACAAATTATGGCACATGCTGGAACAGCAAATCCAGGAAACTTCATACCCATATGGAATTGGATTGATCCAACTGGTTTTGAGAAACGGATAATGAATGTTGGACAAAGGGCAGATGCGCAACTTCAAGGATTGATTGATGAGATTCGAAATAAAAAGGATGAAGGGAACACTATGATTGACCGTTTACTTTGCTTGCAGAAAACTGAGCCTGAATATTACAGTGACCAAATTATCAAAGGACTCATTCAAGTTATATTATTGGCAGGGATTGACACGACAGCTGTGACTTTAGAATGGGCACTATCTCAATTGCTCAACAATCCGCAGGTGTTAAAGAAAGCAAAGGCTGAGATAGACTGTTTGATTGGACAAGAGCGTCTAGTTAATGAAGCTGATATTCCAAGTTTGAATTATCTTCGAGGAATAATCTCTGAGACATTGCGGCTAAACCCAGCAGCTCCTCTCCTTTTGCCACACTGTGCATTTGAAGATTCCAAAATAGAAGGATATGATGTTCCACGTGACACAATTATATTGATTAATGCCTGGGCTATACATACAAACCCAAATCTATGGGAAGATGCCACCAATTTTGAACCTGAAAGGCATGCAAATTCAAATGCAATTCAGGGTGACTCATGCAAACTAATACCATTTGGGTTGGGGAGGAGGGCCTGTCCTGGTGTGGGAGTGGCGCAACGAGTGGTTGGCTTAACTTTAGCATCATTGATACAATGCTTCGAATGGGAAAGAGCGAGTGGCTCATTAGTTGACATGAGAGAAGGTAAAGGGCTAACAATGCCCAAAGCTCAACCGTTGGTAGCTAAGTGTAAACCACGTCCAATCATGAAAGCCATTCTCAATGCACCAACTGGCAATATTTGA | 1509 | 43.07 | MDILLLSISVFLFSLLLAFNFLLRPHRLNLPPTPPFSLPLIGHLHLLKHPLHRTLHKLSQKYGHLFSLRFGSRLVVIVSSPSAVHECLSKNDIVLANRPLLNTGKHLAYNHTTMAASPYGDHWRNLRRIASLEIFSTSRLNLFLGIREHEVKRLLCKLCHDSWEEFRLVELEPMLFDLMFNIIMRMMVGNKFNSEDDGNSEGFKELVTQIMAHAGTANPGNFIPIWNWIDPTGFEKRIMNVGQRADAQLQGLIDEIRNKKDEGNTMIDRLLCLQKTEPEYYSDQIIKGLIQVILLAGIDTTAVTLEWALSQLLNNPQVLKKAKAEIDCLIGQERLVNEADIPSLNYLRGIISETLRLNPAAPLLLPHCAFEDSKIEGYDVPRDTIILINAWAIHTNPNLWEDATNFEPERHANSNAIQGDSCKLIPFGLGRRACPGVGVAQRVVGLTLASLIQCFEWERASGSLVDMREGKGLTMPKAQPLVAKCKPRPIMKAILNAPTGNI | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 30508446 | 30510262 | + | Maker00031144 | Lcy8g0846 | 639738 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0846 | 502 | PRINTS | P450 superfamily signature | 425 | 434 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | SUPERFAMILY | Cytochrome P450 | 31 | 488 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | Pfam | Cytochrome P450 | 32 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | Gene3D | Cytochrome P450 | 8 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 178 | 196 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 348 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 434 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | PRINTS | E-class P450 group I signature | 424 | 434 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0846 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 427 | 436 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy8g0846 | 502 | FunFam | Cytochrome P450 family protein | 22 | 491 | - | - | |
| Lcy8g0846 | 502 | CDD | CYP81 | 63 | 481 | - | - | |
| Lcy8g0846 | 502 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 488 | IPR050651 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy8g0846 | Lcy-Chr8:30508446 | Lcy8g0853 | Lcy-Chr8:30776440 | 3.20E-268 | dispersed | |
| Lcy8g0844 | Lcy-Chr8:30430463 | Lcy8g0846 | Lcy-Chr8:30508446 | 6.57E-278 | proximal | |
| Lcy8g0846 | Lcy-Chr8:30508446 | Lcy8g0847 | Lcy-Chr8:30592081 | 1.62E-293 | tandem | |
| Lcy4g1582 | Lcy-Chr4:39876299 | Lcy8g0846 | Lcy-Chr8:30508446 | 9.55E-60 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0846 | K13260 | - | csv:101204413 | 704.901 |