Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0847 | ATGGATATTCTCTTGCTTTCCATTTCTCTCTTTCTATTTTCTCTTCTCTTTGTCTTCAACTTTCTGCGGCGAGCTCATCGCCTGAACCTTCCACCAAGCCCTCCTTTTTGTCTTCCACTAATAGGCCATCTCCATCTCCTCGAACACCCTGTCCATCGAACATTCCACAAGCTCTCCCAAAAATATGGCCATGTCTTCTCCCTTCGCTTTGGTTCACGTCTTGTTGTAGTTGTCTCATCTTCTTCTGCCGTACAAGAATGCTTTACAAAGAACGACATCATTCTTGCAAATCGGCCATTGTTGGTGTCGGGAAAGCACTTCGCATTCAACCATACAACCATGTCGGTCTCCCCTTATGGTGAACACTGGCGCAACCTCCGCCGGATCGGCTCCCTCCAGATTTTCTCAACAAGCCGCCTCAATTCGTTCTTGGGAATTCGAGAACATGAAGTCAAGCGTTTACTGTGCAATTTATGTGGTGATAATTCGTTGGAAGAGTTCAGGCTTGTTGAATTGGAGCCCATGTTGTCAGATCTTATGTTCAATATTGTTATGAGAATGGTGGCTGGAAAGAAGTTTTATGAAGAGGATGTGTTGGATGAGGGACATTCTAAGAAGTTTAGAGAGTTGGTGACACAAATTATGGCACTTGGTGGGGCAACGAATCCTGGAGACTTCATACCCATTTGGAATTGGATTGATCCAACTGGTGCTGAGAAGAGGATGATGAAACTTGCACAAAGATCAGATGAACTCCTTCAAGAATTAATTGATGAGATTCGGATTAAAAAAGATGGAGGGAATACTATGATTGACCATTTACTTCGCTTGCAGAAAACTGAGCCTCAATATTACAGCGACCAAATTATCAAAGGACTCATTCAAGATATATTTTTAGCCGGGATTGACACATCAGCTGTGACTTTAGAGTGGGCACTATCTCAATTGCTGAACAATCCAGAGGTGCTGAAGAAAGCAAAAGTCGAGATAGACTGTTTGATTGGACAAGAGCGGCTAGTTAATGAAGCTGATTTGCCAAGTTTGAGTTATCTTCAAGGAGTAATCTTTGAGACTTTACGGCTTAACCCAGCAGCACCTCTCCTTGTGCCACACTGTGCATTTGACAACTGCAAAATAGAAGGATATGATATTCCACGAGACACAATTATATTGGTTAATGCTTGGGCTTTACATAGAGACCCAAATCTATGGGAAGATGCCAACAGTTTTAAACCTGAAAGGCATGCAGATGCGATTGAAGGTGACTCATATAGACTAATACCATTTGGGTTGGGGAGGAGAGCATGCCCTGGTATGGGAATGGCGCAACGACTACTTGGCTTGACTTTAGCATCATTAATACAATGCTTTGAATGGGAAAGAGTAAGTAACTCATTAGTCGATATGAGTGAAGGTAAAGGGCTCACAATGCCTAAAGCTCAACCTTTGGTAGCTAAGTGTAGACCACGCCCCATCATGAAAGGGATTTTCAATGTAGCATAG | 1503 | 42.85 | MDILLLSISLFLFSLLFVFNFLRRAHRLNLPPSPPFCLPLIGHLHLLEHPVHRTFHKLSQKYGHVFSLRFGSRLVVVVSSSSAVQECFTKNDIILANRPLLVSGKHFAFNHTTMSVSPYGEHWRNLRRIGSLQIFSTSRLNSFLGIREHEVKRLLCNLCGDNSLEEFRLVELEPMLSDLMFNIVMRMVAGKKFYEEDVLDEGHSKKFRELVTQIMALGGATNPGDFIPIWNWIDPTGAEKRMMKLAQRSDELLQELIDEIRIKKDGGNTMIDHLLRLQKTEPQYYSDQIIKGLIQDIFLAGIDTSAVTLEWALSQLLNNPEVLKKAKVEIDCLIGQERLVNEADLPSLSYLQGVIFETLRLNPAAPLLVPHCAFDNCKIEGYDIPRDTIILVNAWALHRDPNLWEDANSFKPERHADAIEGDSYRLIPFGLGRRACPGMGMAQRLLGLTLASLIQCFEWERVSNSLVDMSEGKGLTMPKAQPLVAKCRPRPIMKGIFNVA | 500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 30592081 | 30593904 | + | Maker00031211 | Lcy8g0847 | 639739 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0847 | 500 | Gene3D | Cytochrome P450 | 20 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | CDD | CYP81 | 63 | 483 | - | - | |
| Lcy8g0847 | 500 | SUPERFAMILY | Cytochrome P450 | 31 | 490 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | FunFam | Cytochrome P450 family protein | 21 | 493 | - | - | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 309 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 289 | 306 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 352 | 370 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 83 | 104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | E-class P450 group I signature | 393 | 417 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PANTHER | CYTOCHROME P450 82C3-RELATED | 13 | 490 | IPR050651 | - | |
| Lcy8g0847 | 500 | Pfam | Cytochrome P450 | 32 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | P450 superfamily signature | 300 | 317 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | P450 superfamily signature | 353 | 364 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0847 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy8g0844 | Lcy-Chr8:30430463 | Lcy8g0847 | Lcy-Chr8:30592081 | 1.64E-296 | dispersed | |
| Lcy8g0847 | Lcy-Chr8:30592081 | Lcy8g0853 | Lcy-Chr8:30776440 | 6.94E-274 | dispersed | |
| Lcy8g0846 | Lcy-Chr8:30508446 | Lcy8g0847 | Lcy-Chr8:30592081 | 1.62E-293 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0847 | K13260 | - | csv:101204413 | 710.294 |