Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0851 ATGGATAATAATTTGCTTTACATTTTCCTCTGCCTGATCTCCCTCCTTTTTGCCCTCAAATTTTTGCTGCGCCATGGCAGAAACCTCCCACCAAGCCCACTCTTTTCCCTTCCATTAATAGGCCATTTCCATCTGCTAAGACATCCCATCCACCGCAATCTTCACGAGCTCTCAAAGAAGCATGGCCACGTCTTCTCTCTCTGGTTTGGTTCTCGTCTCGCTGTAGTTGTATCATCTCCTTCCGCCGTTCGTGAATGCTTCACAAAGAACGACATCGTTCTCGCAAATCGCCCATTTCTCAACACTGGAAAGCACTTGGCCTACAACTTTACCGTACTCGCCGTCGCCCCTTACGGCGAGCTTTGGCGTAACCTTCGCCGCATCAGTACTCACGAGATTTTCTCTGCAAGCCGACTTAATTTGTTCTCCGGAATCCGACAAGATGAAGTCAAGCGCTTGTTGTGTAAATTATGCGGCGATTCGGTGGAAGAATTCTCTGTCGTCGAGCTTGAGCCGATGCTTTTGGATCTTACGTCTAACATCGTCATGAGGATGGTCGCCGGAAAGAGGTATTTTGGAGACGACGTGTCGGATGAAGGAAAAGCGAGGCAATTTAGAGATGTTGTGAAGCGAGTTATGTTGTATGCTGGGGTGACAAATCCAGGAGACTTTATACCCATATGGAATTGGATTGATCCAACTGGTCTGGAGAAGAAGATAATGAAGATTGGACAGGAAGCTGATGCAATCTTTCAGGCTTTAATCGATGAGATTCGGAGCCAAAAAGAACGTGGAAATACGATGATTGATCATTTACTTCACTTGCAGAGCTCCCAACCTGAATACTTCAATGACCAAATTATCAAAGGCCTCATACATGTTATACTACTGGCAGGGATCGATACAACGGCTGTGACATTAGAATGGGCAGTCTCCCACTTGCTCAACGAACCAGAGGTGATAAAGAAAGCGAGATTTGAGATAGAGAGTTTCACTGGACAAGAACGTTTGGTTAATGAAGATGATTTGTCGAGTTTGAGTTATGTGCAAGGAATAATTTTGGAGACTCTGCGGTTGACCCCAGCAGCTCCTATGCTTGTGCCGCACTGTGCATCTGAAGATTGCAAAATAGAAGGCTATGATGTACCACGTGACACGATTGTGTTTGTTAACGCTTGGGCTATACATAGAGATCCAAACCTATGGGAAGATGTCACTAGTTTTAAGCCTGAAAGGCATGAAACTGCAAATGAGTCGTTTGATTCATACAAACTGTTACCATTCGGGTTGGGGAGGAGGGCATGCCCTGGTGTAGGAATGGCGCAACGTGTGGTTGGCTTGACCTTGGCGTCATTGATTCAATGTTTTGATTGGGAAAGAATGAGTAGTTCATTGGTTGACATGACTGAAGGACAAGGGATCACTATGCCGAAAGCTCAGCCATTGGTAGCCAAGTGTAAACCACGCCCTATTATGAGAGCTCTTGTTAGTGAAATAATTCACCCTTTTTAA 1512 45.3 MDNNLLYIFLCLISLLFALKFLLRHGRNLPPSPLFSLPLIGHFHLLRHPIHRNLHELSKKHGHVFSLWFGSRLAVVVSSPSAVRECFTKNDIVLANRPFLNTGKHLAYNFTVLAVAPYGELWRNLRRISTHEIFSASRLNLFSGIRQDEVKRLLCKLCGDSVEEFSVVELEPMLLDLTSNIVMRMVAGKRYFGDDVSDEGKARQFRDVVKRVMLYAGVTNPGDFIPIWNWIDPTGLEKKIMKIGQEADAIFQALIDEIRSQKERGNTMIDHLLHLQSSQPEYFNDQIIKGLIHVILLAGIDTTAVTLEWAVSHLLNEPEVIKKARFEIESFTGQERLVNEDDLSSLSYVQGIILETLRLTPAAPMLVPHCASEDCKIEGYDVPRDTIVFVNAWAIHRDPNLWEDVTSFKPERHETANESFDSYKLLPFGLGRRACPGVGMAQRVVGLTLASLIQCFDWERMSSSLVDMTEGQGITMPKAQPLVAKCKPRPIMRALVSEIIHPF 503
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 30720861 30723549 - Maker00031173 Lcy8g0851 639743
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0851 503 SUPERFAMILY Cytochrome P450 30 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 Pfam Cytochrome P450 31 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0851 503 Gene3D Cytochrome P450 23 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PANTHER CYTOCHROME P450 82C3-RELATED 15 489 IPR050651 -
Lcy8g0851 503 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 FunFam Cytochrome P450 family protein 22 492 - -
Lcy8g0851 503 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0851 503 CDD CYP81 62 482 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g0851 Lcy-Chr8:30720861 Lcy13g1039 Lcy-Chr13:22711472 9.22E-163 dispersed
Lcy8g0851 Lcy-Chr8:30720861 Lcy8g0853 Lcy-Chr8:30776440 4.90E-256 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0851 K13260 - csv:105434396 822.387