Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0851 | ATGGATAATAATTTGCTTTACATTTTCCTCTGCCTGATCTCCCTCCTTTTTGCCCTCAAATTTTTGCTGCGCCATGGCAGAAACCTCCCACCAAGCCCACTCTTTTCCCTTCCATTAATAGGCCATTTCCATCTGCTAAGACATCCCATCCACCGCAATCTTCACGAGCTCTCAAAGAAGCATGGCCACGTCTTCTCTCTCTGGTTTGGTTCTCGTCTCGCTGTAGTTGTATCATCTCCTTCCGCCGTTCGTGAATGCTTCACAAAGAACGACATCGTTCTCGCAAATCGCCCATTTCTCAACACTGGAAAGCACTTGGCCTACAACTTTACCGTACTCGCCGTCGCCCCTTACGGCGAGCTTTGGCGTAACCTTCGCCGCATCAGTACTCACGAGATTTTCTCTGCAAGCCGACTTAATTTGTTCTCCGGAATCCGACAAGATGAAGTCAAGCGCTTGTTGTGTAAATTATGCGGCGATTCGGTGGAAGAATTCTCTGTCGTCGAGCTTGAGCCGATGCTTTTGGATCTTACGTCTAACATCGTCATGAGGATGGTCGCCGGAAAGAGGTATTTTGGAGACGACGTGTCGGATGAAGGAAAAGCGAGGCAATTTAGAGATGTTGTGAAGCGAGTTATGTTGTATGCTGGGGTGACAAATCCAGGAGACTTTATACCCATATGGAATTGGATTGATCCAACTGGTCTGGAGAAGAAGATAATGAAGATTGGACAGGAAGCTGATGCAATCTTTCAGGCTTTAATCGATGAGATTCGGAGCCAAAAAGAACGTGGAAATACGATGATTGATCATTTACTTCACTTGCAGAGCTCCCAACCTGAATACTTCAATGACCAAATTATCAAAGGCCTCATACATGTTATACTACTGGCAGGGATCGATACAACGGCTGTGACATTAGAATGGGCAGTCTCCCACTTGCTCAACGAACCAGAGGTGATAAAGAAAGCGAGATTTGAGATAGAGAGTTTCACTGGACAAGAACGTTTGGTTAATGAAGATGATTTGTCGAGTTTGAGTTATGTGCAAGGAATAATTTTGGAGACTCTGCGGTTGACCCCAGCAGCTCCTATGCTTGTGCCGCACTGTGCATCTGAAGATTGCAAAATAGAAGGCTATGATGTACCACGTGACACGATTGTGTTTGTTAACGCTTGGGCTATACATAGAGATCCAAACCTATGGGAAGATGTCACTAGTTTTAAGCCTGAAAGGCATGAAACTGCAAATGAGTCGTTTGATTCATACAAACTGTTACCATTCGGGTTGGGGAGGAGGGCATGCCCTGGTGTAGGAATGGCGCAACGTGTGGTTGGCTTGACCTTGGCGTCATTGATTCAATGTTTTGATTGGGAAAGAATGAGTAGTTCATTGGTTGACATGACTGAAGGACAAGGGATCACTATGCCGAAAGCTCAGCCATTGGTAGCCAAGTGTAAACCACGCCCTATTATGAGAGCTCTTGTTAGTGAAATAATTCACCCTTTTTAA | 1512 | 45.3 | MDNNLLYIFLCLISLLFALKFLLRHGRNLPPSPLFSLPLIGHFHLLRHPIHRNLHELSKKHGHVFSLWFGSRLAVVVSSPSAVRECFTKNDIVLANRPFLNTGKHLAYNFTVLAVAPYGELWRNLRRISTHEIFSASRLNLFSGIRQDEVKRLLCKLCGDSVEEFSVVELEPMLLDLTSNIVMRMVAGKRYFGDDVSDEGKARQFRDVVKRVMLYAGVTNPGDFIPIWNWIDPTGLEKKIMKIGQEADAIFQALIDEIRSQKERGNTMIDHLLHLQSSQPEYFNDQIIKGLIHVILLAGIDTTAVTLEWAVSHLLNEPEVIKKARFEIESFTGQERLVNEDDLSSLSYVQGIILETLRLTPAAPMLVPHCASEDCKIEGYDVPRDTIVFVNAWAIHRDPNLWEDVTSFKPERHETANESFDSYKLLPFGLGRRACPGVGMAQRVVGLTLASLIQCFDWERMSSSLVDMTEGQGITMPKAQPLVAKCKPRPIMRALVSEIIHPF | 503 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 30720861 | 30723549 | - | Maker00031173 | Lcy8g0851 | 639743 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0851 | 503 | SUPERFAMILY | Cytochrome P450 | 30 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | Pfam | Cytochrome P450 | 31 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 428 | 437 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy8g0851 | 503 | Gene3D | Cytochrome P450 | 23 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PANTHER | CYTOCHROME P450 82C3-RELATED | 15 | 489 | IPR050651 | - | |
| Lcy8g0851 | 503 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | P450 superfamily signature | 426 | 435 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | P450 superfamily signature | 298 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | FunFam | Cytochrome P450 family protein | 22 | 492 | - | - | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 435 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 177 | 195 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 287 | 304 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 391 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 425 | 435 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 350 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 58 | 77 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 307 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | PRINTS | E-class P450 group I signature | 82 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0851 | 503 | CDD | CYP81 | 62 | 482 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy8g0851 | Lcy-Chr8:30720861 | Lcy13g1039 | Lcy-Chr13:22711472 | 9.22E-163 | dispersed | |
| Lcy8g0851 | Lcy-Chr8:30720861 | Lcy8g0853 | Lcy-Chr8:30776440 | 4.90E-256 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0851 | K13260 | - | csv:105434396 | 822.387 |