Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0864 ATGGAAGGTCTCTCTGCTCTCCTTCTGCTCCTTCTTGCTTTCCTTTTCCTGCAACATTTCCGAACCCGCCGGAGAAATCTGCCGCCAAGCCCACCGTCTGTTCCGATCATCGGCCACCTCCACCTTCTGAAACGCCCAATCCACCGAAATTTCCAAAACATCGCCGCCAAATACGGCCCCATTTTCACTCTCCGATTCGGATCTCGCCTTGCCCTTGTAGTCTCTTCACTCCAAATAGCCGAAGAATGCTTCAGCAAGAACGACGTCGTCTTCGCCAACCGCGCTGGTCTCCTCATCAGCAAATATCTCGGCTACAACAGCACCACCATCACCACCGCCCCTTACGGCGACCACTGGCGGAACCTCCGCCGCCTGTCCACTGCCGAGATCTTCTCCACGGCGCGACTCAACGCGTCTCTGAGCATTCGGAAGGATGAAATCCGGCGACTGTTGGTCAAACTCCATTCCGAATCGTTCGCTAAGGTGGAGTTGAAATCGATGTTTTCGGAGCTGACTTTCAACGTCGTGATGAGGGTCGTGGCCGGAAAACGATACTACGGCGAGGAGGTTTCCGATGAGGCGGAGGCGAGGGAGTTCAGAGAGCTTATGGATGAGATTTCGGTTCATGGAGGAGCTTCGAATTGGATCGATTATATGGCGAGTTTGAAATGGATTGGTTGTGATGGATATGAGAAGATTTTGGCGAAATTGGGGAAGAGGGCCGATCGATTTATGCAGGAATTGATTGAAGAACGCCGGAATAAGAAAGTTTCAGAAAGAGAAAAACAGAGTTCTCTGCTTGATCGGCTTCTGGAGTTGCAGGTGTCTGAACCGGATTACTACACCGATAAGATCATCAAGGGGGTCGTTCTGGTTCTGTTGCGTGCGGGAACGGACTCATCATCTGTGACTTTGGATTGGGCAGCGACTCAACTGCTCAACAATCCGGAGGTGTTAGCCAAAGCCAGAGCTGAGATAGACACCAAGATCGGTCAAGATCGACCCGTTGATGAAGCAGATCTCTCCAGCCTCAACTATCTTCAAGCCATTATTTCCGAGACCTTCCGCTTGCACCCTGCCGCTCCGATGCTCCTCACACACTATTCCTCCGACAATTGCACCGTCGCAGGCTACAATATTCCTCGTGGGACAACGTTGTTGGTCAATGCATGGGCAATTCATAGAGATCCGAAGCTATGGGACGACCCGACGAGCTTCCGACCGGAGAGGTTTTTGGGGGCTGGAAATGAGTTGCAGTCGAACAAACTCATCCCTTTTGGGATGGGAAGGAGGGCTTGTCCTGGGGCAACTATGGCTCAACGTTTTATAGGATTGACTTTGGGGCTATTGATTCAGTGTTATGAGTGGAAAAAGGCTGGAGAAGAAAAGGTGGACATGGCTGAAGGTGGAGGTATTACCATTCAAAAAGTCAACCCTTTGGAAACCATGTGTAAAGCTCGCCCAATTATGGATAAAGTGTTATTAAATGGCTTGGACTAA 1500 50.67 MEGLSALLLLLLAFLFLQHFRTRRRNLPPSPPSVPIIGHLHLLKRPIHRNFQNIAAKYGPIFTLRFGSRLALVVSSLQIAEECFSKNDVVFANRAGLLISKYLGYNSTTITTAPYGDHWRNLRRLSTAEIFSTARLNASLSIRKDEIRRLLVKLHSESFAKVELKSMFSELTFNVVMRVVAGKRYYGEEVSDEAEAREFRELMDEISVHGGASNWIDYMASLKWIGCDGYEKILAKLGKRADRFMQELIEERRNKKVSEREKQSSLLDRLLELQVSEPDYYTDKIIKGVVLVLLRAGTDSSSVTLDWAATQLLNNPEVLAKARAEIDTKIGQDRPVDEADLSSLNYLQAIISETFRLHPAAPMLLTHYSSDNCTVAGYNIPRGTTLLVNAWAIHRDPKLWDDPTSFRPERFLGAGNELQSNKLIPFGMGRRACPGATMAQRFIGLTLGLLIQCYEWKKAGEEKVDMAEGGGITIQKVNPLETMCKARPIMDKVLLNGLD 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31169750 31172510 + Maker00001725 Lcy8g0864 639756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0864 499 SUPERFAMILY Cytochrome P450 28 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0864 499 Gene3D Cytochrome P450 20 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PANTHER CYTOCHROME P450 82C3-RELATED 9 487 IPR050651 -
Lcy8g0864 499 CDD CYP81 59 480 - -
Lcy8g0864 499 Pfam Cytochrome P450 28 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 Coils Coil 241 261 - -
Lcy8g0864 499 FunFam Cytochrome P450 family protein 19 490 - -
Lcy8g0864 499 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 171 189 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0864 499 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0976 Lcy-Chr10:31318685 Lcy8g0864 Lcy-Chr8:31169750 1.74E-69 dispersed
Lcy8g0864 Lcy-Chr8:31169750 Lcy13g1039 Lcy-Chr13:22711472 4.90E-305 dispersed
Lcy9g2109 Lcy-Chr9:45787319 Lcy8g0864 Lcy-Chr8:31169750 2.25E-14 dispersed
Lcy1g2267 Lcy-Chr1:34025769 Lcy8g0864 Lcy-Chr8:31169750 8.54E-38 wgd
Lcy5g0828 Lcy-Chr5:13116027 Lcy8g0864 Lcy-Chr8:31169750 1.38E-82 wgd
Lcy7g1694 Lcy-Chr7:34189017 Lcy8g0864 Lcy-Chr8:31169750 3.32E-63 wgd
Lcy8g0103 Lcy-Chr8:2370845 Lcy8g0864 Lcy-Chr8:31169750 7.15E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0864 K13260 - csv:101210967 768.459