Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0890 ATGAGCTGCCATTGGAACTGCGAAATTCTTGTGTTTCTTCTTCTTCTTCTTCTTCAATGTTGTTGTAATGGCCTGAATTTTGATGGGGTTCTCTTGCTTTCCTTTAAGTATGGCGTTTTGGACGACCCTCTTTTTGTTCTTCAAAACTGGAATTACTCCGACGACACGCCCTGTTCATGGCGGGGAGTCACATGCGCCGGTGCCGCTGGCTCTAGAGTTACGGCTTTATCTCTGCCGAACTCTCAGCTTATGGGCTCTGTTTCTCCTGATCTGGGTTTGATCGAAACCCTTCAATCTGTTGATCTTTCGAATAATTCCTTTAATGGGTCTCTTCCCTTCTCTCTGTTCAACGCCACCATGCTCCGGTTTCTTGATTTGTCCGAGAATTTGATCTCCGACGAGGTTCCGGCGGCGGTCAGTCGACTAGGGAATCTGCAAGTTCTTAACCTATCCGGCAATGCTCTGTCCGGGAAGTTTCCGAGGGATCTTGCGAATTTGGGTAATCTCACGGTTGTGTCTCTGAAGAACAATTACATTTCCGGTGAGATTCCCGGTGGGTTCAGAACGGTGCAAGTTTTGGATCTGTCTTCTAATTTGATTAATGGGTCGTTGCCGTCTGATTTCGGTGGCGACAGTTTACGTTACTTCAACATTTCATACAACAGACTTTCCGGCGTAATCCCGCCGGATTTCGCCGACAAAATTCCGGCCAACGCTACGATTGATCTCTCCTTCAATAACCTCACCGGCGAAGTCCCTGTTTCCGACGTGTTCATGAACCAAGAAGCAAATTCCTTCACCGGAAACCACCAACTCTGCGGCGAGTTAACGAAAACCCCATGCCCAATTCCTTCATCGCCGGCGTCTCTCCCGCCGGCGATCGCCGCCATTCCAATAGACCCAAGTACTCCAGAAACCACCTCGCCGGAAAAACAGAGCGAAACAGGGTTCAAGCCCTCAACAATCGTCGCCATTGTACTCGGCGACACCGTCGGACTAGCAATTCTGTGCCTCCTCTTCTTCTACGTCTACCACTTGAAGAAAAAAAACAAAACCGTCGAAACCGATTTGAAAAACGAAGCCAATTTAGCCAAAGACAGCTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCGCGATGGTCCTGCCTGAGAAAAACAGAGGACCCGGAAGAGGGAAATTCCGAGCAGGCGAGCGTCGGGTCCGTCTCCGGGCACCGCGAGACGGCGGAGGAGGGAAACAAGAGGGGGACTTTGGTGACGGTGGACGGCGGAGAGAAGGAGCTGGAACTGGAGACGCTGTTGAAGGCGTCGGCGTACATTCTGGGCGCCACCGGATCGAGCATAACGTACAAGGCGGTGCTGGAAGACGGGACGGCGTTTGCCGTGAGGAGAATCGGAGACGGCGGAGTGGAGAAGTACAAGGATTTCGAGAACCAGATTCGAGTCGTGGCTAAATTAGTTCACCCAAATTTGGTTCGTATTCGTGGGTTTTATTGGGGCGTGGACGAGAAGCTCATTATCTATGATTTTGTTCCTAATGGTAGCCTCGCCAATGCTCGTTACAGGAAAGTGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGAATAGTAAAAGGACTGGCCCGTGGCCTCTCTTATCTTCACGACAAGAAGCATGTCCATGCCAACCTGCGCCCCAGCAACATTCTTCTGGGCTACGACATGGAGCCCAAGATAGGCGATTTCGGCCTCGAGAAGCTCACCTTGGGCGACTCGAGCTACAAAGCCGGTGGCTCCACTCGCAACTTCGGTAGCAAGAGATCTACTGCATCTCGAGATAGCTTCCAGGATTTCGTCGCTGGACCGAGCCCTGGACCGAGTCCGAGCTCGATCAGTGGGGTGTCGCCGTATCTAGCACCGGAATCGCTTCGGAGCCTGAAGCCGAACCCGAAATGGGACGTGTACTCGTTTGGGGTGATATTGTTGGAGCTACTGACGGGAAAGATCGTAGTGTTGGACGAGTTGGGTCAAGGGCTTGGGCTTGCGGTCGAAGACAAGAGCCGAGCCGTAAGGATGGCTGACATGTCGATTCGAGCTGACGTGGAGGGGAGAGAAGAAGCGTTGTTGTCTTTGTTTAAATTAGGGTATAGTTGTGCATCTCCTACCCCACAAAAGAGACCATCCATGAAAGAAGCCTTGCAAGTTTTGGAGAAATTTCCAACCATATCAACTTCATCACACTATTATGGTCTCTAG 2247 51.31 MSCHWNCEILVFLLLLLLQCCCNGLNFDGVLLLSFKYGVLDDPLFVLQNWNYSDDTPCSWRGVTCAGAAGSRVTALSLPNSQLMGSVSPDLGLIETLQSVDLSNNSFNGSLPFSLFNATMLRFLDLSENLISDEVPAAVSRLGNLQVLNLSGNALSGKFPRDLANLGNLTVVSLKNNYISGEIPGGFRTVQVLDLSSNLINGSLPSDFGGDSLRYFNISYNRLSGVIPPDFADKIPANATIDLSFNNLTGEVPVSDVFMNQEANSFTGNHQLCGELTKTPCPIPSSPASLPPAIAAIPIDPSTPETTSPEKQSETGFKPSTIVAIVLGDTVGLAILCLLFFYVYHLKKKNKTVETDLKNEANLAKDSWSTSSSESRGFSRWSCLRKTEDPEEGNSEQASVGSVSGHRETAEEGNKRGTLVTVDGGEKELELETLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRVVAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEARLRIVKGLARGLSYLHDKKHVHANLRPSNILLGYDMEPKIGDFGLEKLTLGDSSYKAGGSTRNFGSKRSTASRDSFQDFVAGPSPGPSPSSISGVSPYLAPESLRSLKPNPKWDVYSFGVILLELLTGKIVVLDELGQGLGLAVEDKSRAVRMADMSIRADVEGREEALLSLFKLGYSCASPTPQKRPSMKEALQVLEKFPTISTSSHYYGL 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32132780 32135842 + Maker00001761 Lcy8g0890 639782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0890 748 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 189 735 IPR050647 -
Lcy8g0890 748 MobiDBLite consensus disorder prediction 301 315 - -
Lcy8g0890 748 FunFam Leucine-rich repeat receptor-like protein kinase 189 283 - -
Lcy8g0890 748 Pfam Protein kinase domain 442 731 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g0890 748 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lcy8g0890 748 ProSiteProfiles Protein kinase domain profile. 436 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g0890 748 Gene3D Phosphorylase Kinase; domain 1 404 511 - -
Lcy8g0890 748 Pfam Leucine Rich Repeat 168 188 IPR001611 GO:0005515(InterPro)
Lcy8g0890 748 Pfam Leucine Rich Repeat 190 209 IPR001611 GO:0005515(InterPro)
Lcy8g0890 748 Pfam Leucine Rich Repeat 212 232 IPR001611 GO:0005515(InterPro)
Lcy8g0890 748 Pfam Leucine Rich Repeat 144 166 IPR001611 GO:0005515(InterPro)
Lcy8g0890 748 Pfam Leucine Rich Repeat 97 117 IPR001611 GO:0005515(InterPro)
Lcy8g0890 748 SUPERFAMILY L domain-like 30 274 - -
Lcy8g0890 748 SUPERFAMILY Protein kinase-like (PK-like) 441 736 IPR011009 -
Lcy8g0890 748 FunFam Leucine-rich repeat receptor-like protein kinase 25 185 - -
Lcy8g0890 748 MobiDBLite consensus disorder prediction 612 631 - -
Lcy8g0890 748 Gene3D Ribonuclease Inhibitor 26 187 IPR032675 -
Lcy8g0890 748 Gene3D Ribonuclease Inhibitor 188 283 IPR032675 -
Lcy8g0890 748 MobiDBLite consensus disorder prediction 386 417 - -
Lcy8g0890 748 Gene3D Transferase(Phosphotransferase) domain 1 512 744 - -
Lcy8g0890 748 MobiDBLite consensus disorder prediction 294 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1468 Lcy-Chr10:38633280 Lcy8g0890 Lcy-Chr8:32132780 9.81E-95 dispersed
Lcy7g0496 Lcy-Chr7:4404296 Lcy8g0890 Lcy-Chr8:32132780 1.80E-84 dispersed
Lcy8g0890 Lcy-Chr8:32132780 Lcy5g0360 Lcy-Chr5:3623020 2.36E-48 dispersed
Lcy6g0502 Lcy-Chr6:4699956 Lcy8g0890 Lcy-Chr8:32132780 1.69E-182 transposed
Lcy8g0890 Lcy-Chr8:32132780 Lcy9g0416 Lcy-Chr9:11658724 2.23E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66105 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0890 - - - 0.0