Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0969 | ATGGAGATTTGGTTCATCGTCCTCATCTCTCTCTGCATCTGCTCTCTTCTCAACTCCATTTTTACCCAATTCCGAAGCTCTACCAACCTCCCACCAAGCCCTCCTTCAATTCCAATTATCACCATTTTCCTACGGCTTCGCAAATCGCCTCTCCAATTTGAATCTCTACTTCGCAGTTTCGCCGCCAAATATGGCCCCATCATCACAATCCACTTCAACAACCACCCTGCCATCTTCATCGCCGATCGCTTCGTTGCCCATAAGGCCCTCCTCCAGAACGGCGTTCTCTTCGCCAACCGTGCACCGCGTCCTCCAACCACCAAAATCTTGAGCAGCAACCAGCCCAACATCAGCTCTGAAAATTACGGCCCACTCTGGCGCCTCCTCCGTCGCAATCTCACTTCCCAAATCCTCCATCCTTCTCGGGTCAAGTCTTACGCTCGAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAATCGCCTTCTCTCTCACTCTGAATCAGGAACTCCCGTCTCCGTTGCCGCTCATTTTCAGTACACCATGTTCTGTTTGTTGGTGTTCATGTGTTTTGGGGACAGGCTTGACGAAACCAAGATCGAGGAAATTTTGAACCTGCAGCGTCAGATACTGGTGAATCTTGGGCGTTCCCGCGTCCTCAATTTCTTGCCGAAATTGACCAAGATTTTCCTTCGAAAGCGCTGGGAGATCCTTTTTGAACTCAGAAGGAATCAAGAGAAAGTCCTCATCCCTTTGATTGAAGCTAGAAGGAAGGCCAACCAAAACAGAGCAAACAGAGCGGAAGGTCAAGAAGACGATGAAGAATTCGTGGTGTCGTATGTGGATACGCTCCTCGATTTGGAGCTCCCCGAGGAGAATAGAAAGCTTACAGATGACGAGATGGTCACCATAAGCTTCGAATTCCTCAGCGCTGGCAGCGACAACACCTCCACGGCCTTGCAGTGGATAATGGCGAATATAGTGAAATACCCAGAAATTCAAAACAAGCTTTTCGCTGAGATCAAAGGAGTAATGGGAGAGGAATCAGGGGAGGAGGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATTTTTAAATGCTGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGTGCATTTCCTGCTACCACACGCAGTGAAAGAAGATACAATGTTGGAAAATTATGTGATACCAAAGAATGGAACTGTGAATTTCATGGTAGCGGAGATGGGTTGGGATCCAGAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAATTGCAAAGATGAAGAAGTGGCGTTTGATATAACAGGGAGCAAAGAAATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATGTGTCCAGGATTTGGTTTGGCAATTCTTCATTTGGAGTACTTCGTTGCCAATTTGGTATGGAGCCTCTTCAAGCCAACATACGTCCGAGGTGATTATGCACTGCTCTGTGCCTTTGATGTTGTTTGCTGGATTGAAGGTGTTGAGATACATGGGTGTTCATCGGTTGGTGGCATCGGTTTTAGGCACAAATCGGCATCGAAAACTGACCTGTCGATTGTAGTCAGTCAATGA | 1611 | 47.86 | MEIWFIVLISLCICSLLNSIFTQFRSSTNLPPSPPSIPIITIFLRLRKSPLQFESLLRSFAAKYGPIITIHFNNHPAIFIADRFVAHKALLQNGVLFANRAPRPPTTKILSSNQPNISSENYGPLWRLLRRNLTSQILHPSRVKSYARARKWVLDILLNRLLSHSESGTPVSVAAHFQYTMFCLLVFMCFGDRLDETKIEEILNLQRQILVNLGRSRVLNFLPKLTKIFLRKRWEILFELRRNQEKVLIPLIEARRKANQNRANRAEGQEDDEEFVVSYVDTLLDLELPEENRKLTDDEMVTISFEFLSAGSDNTSTALQWIMANIVKYPEIQNKLFAEIKGVMGEESGEEEVKEEDLGKLPFLNAVVLEGLRRHPPVHFLLPHAVKEDTMLENYVIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFMKGGNCKDEEVAFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFVANLVWSLFKPTYVRGDYALLCAFDVVCWIEGVEIHGCSSVGGIGFRHKSASKTDLSIVVSQ | 536 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 34226094 | 34227852 | - | Maker00001244 | Lcy8g0969 | 639861 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0969 | 536 | Pfam | Cytochrome P450 | 31 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | FunFam | Cytochrome P450 family protein | 24 | 493 | - | - | |
| Lcy8g0969 | 536 | Gene3D | Cytochrome P450 | 24 | 487 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | SUPERFAMILY | Cytochrome P450 | 31 | 481 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0969 | 536 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy8g0969 | 536 | CDD | CYP77_89 | 63 | 480 | - | - | |
| Lcy8g0969 | 536 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 10 | 481 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy8g0964 | Lcy-Chr8:34115740 | Lcy8g0969 | Lcy-Chr8:34226094 | 1.76E-59 | dispersed | |
| Lcy8g0966 | Lcy-Chr8:34203358 | Lcy8g0969 | Lcy-Chr8:34226094 | 4.63E-259 | dispersed | |
| Lcy8g0969 | Lcy-Chr8:34226094 | Lcy8g0973 | Lcy-Chr8:34339365 | 3.36E-274 | dispersed | |
| Lcy8g0969 | Lcy-Chr8:34226094 | Lcy8g0971 | Lcy-Chr8:34286358 | 3.04E-261 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0969 | K24184 | - | csv:101204559 | 681.404 |