Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0969 ATGGAGATTTGGTTCATCGTCCTCATCTCTCTCTGCATCTGCTCTCTTCTCAACTCCATTTTTACCCAATTCCGAAGCTCTACCAACCTCCCACCAAGCCCTCCTTCAATTCCAATTATCACCATTTTCCTACGGCTTCGCAAATCGCCTCTCCAATTTGAATCTCTACTTCGCAGTTTCGCCGCCAAATATGGCCCCATCATCACAATCCACTTCAACAACCACCCTGCCATCTTCATCGCCGATCGCTTCGTTGCCCATAAGGCCCTCCTCCAGAACGGCGTTCTCTTCGCCAACCGTGCACCGCGTCCTCCAACCACCAAAATCTTGAGCAGCAACCAGCCCAACATCAGCTCTGAAAATTACGGCCCACTCTGGCGCCTCCTCCGTCGCAATCTCACTTCCCAAATCCTCCATCCTTCTCGGGTCAAGTCTTACGCTCGAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAATCGCCTTCTCTCTCACTCTGAATCAGGAACTCCCGTCTCCGTTGCCGCTCATTTTCAGTACACCATGTTCTGTTTGTTGGTGTTCATGTGTTTTGGGGACAGGCTTGACGAAACCAAGATCGAGGAAATTTTGAACCTGCAGCGTCAGATACTGGTGAATCTTGGGCGTTCCCGCGTCCTCAATTTCTTGCCGAAATTGACCAAGATTTTCCTTCGAAAGCGCTGGGAGATCCTTTTTGAACTCAGAAGGAATCAAGAGAAAGTCCTCATCCCTTTGATTGAAGCTAGAAGGAAGGCCAACCAAAACAGAGCAAACAGAGCGGAAGGTCAAGAAGACGATGAAGAATTCGTGGTGTCGTATGTGGATACGCTCCTCGATTTGGAGCTCCCCGAGGAGAATAGAAAGCTTACAGATGACGAGATGGTCACCATAAGCTTCGAATTCCTCAGCGCTGGCAGCGACAACACCTCCACGGCCTTGCAGTGGATAATGGCGAATATAGTGAAATACCCAGAAATTCAAAACAAGCTTTTCGCTGAGATCAAAGGAGTAATGGGAGAGGAATCAGGGGAGGAGGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATTTTTAAATGCTGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGTGCATTTCCTGCTACCACACGCAGTGAAAGAAGATACAATGTTGGAAAATTATGTGATACCAAAGAATGGAACTGTGAATTTCATGGTAGCGGAGATGGGTTGGGATCCAGAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAATTGCAAAGATGAAGAAGTGGCGTTTGATATAACAGGGAGCAAAGAAATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATGTGTCCAGGATTTGGTTTGGCAATTCTTCATTTGGAGTACTTCGTTGCCAATTTGGTATGGAGCCTCTTCAAGCCAACATACGTCCGAGGTGATTATGCACTGCTCTGTGCCTTTGATGTTGTTTGCTGGATTGAAGGTGTTGAGATACATGGGTGTTCATCGGTTGGTGGCATCGGTTTTAGGCACAAATCGGCATCGAAAACTGACCTGTCGATTGTAGTCAGTCAATGA 1611 47.86 MEIWFIVLISLCICSLLNSIFTQFRSSTNLPPSPPSIPIITIFLRLRKSPLQFESLLRSFAAKYGPIITIHFNNHPAIFIADRFVAHKALLQNGVLFANRAPRPPTTKILSSNQPNISSENYGPLWRLLRRNLTSQILHPSRVKSYARARKWVLDILLNRLLSHSESGTPVSVAAHFQYTMFCLLVFMCFGDRLDETKIEEILNLQRQILVNLGRSRVLNFLPKLTKIFLRKRWEILFELRRNQEKVLIPLIEARRKANQNRANRAEGQEDDEEFVVSYVDTLLDLELPEENRKLTDDEMVTISFEFLSAGSDNTSTALQWIMANIVKYPEIQNKLFAEIKGVMGEESGEEEVKEEDLGKLPFLNAVVLEGLRRHPPVHFLLPHAVKEDTMLENYVIPKNGTVNFMVAEMGWDPEVWEDPMAFKPERFMKGGNCKDEEVAFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFVANLVWSLFKPTYVRGDYALLCAFDVVCWIEGVEIHGCSSVGGIGFRHKSASKTDLSIVVSQ 536
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 34226094 34227852 - Maker00001244 Lcy8g0969 639861
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0969 536 Pfam Cytochrome P450 31 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 FunFam Cytochrome P450 family protein 24 493 - -
Lcy8g0969 536 Gene3D Cytochrome P450 24 487 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 SUPERFAMILY Cytochrome P450 31 481 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0969 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0969 536 CDD CYP77_89 63 480 - -
Lcy8g0969 536 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 481 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g0964 Lcy-Chr8:34115740 Lcy8g0969 Lcy-Chr8:34226094 1.76E-59 dispersed
Lcy8g0966 Lcy-Chr8:34203358 Lcy8g0969 Lcy-Chr8:34226094 4.63E-259 dispersed
Lcy8g0969 Lcy-Chr8:34226094 Lcy8g0973 Lcy-Chr8:34339365 3.36E-274 dispersed
Lcy8g0969 Lcy-Chr8:34226094 Lcy8g0971 Lcy-Chr8:34286358 3.04E-261 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0969 K24184 - csv:101204559 681.404