Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0971 ATGGAGAACTGGTTCATCATCCTCGTCTCCCTCTGCGTCTGCTCTCTTCTCAGCTCCATTTTTACCCAATTCCGAAGCTCCACCAAGCTTCCACCAGGCCCTCCTTCAATTCCCATCGTCACCACGTTCCAATGGATCCGCAAATCCCCACTCCAAATCCAGTCTCTGCTACGCAGTTTCGTCGCCGAGTACGGCCCCATCCTCACCCTCCGCATCGGCCCCCGCCCCATCATCTTCATCGCCGACCACACCATTGCCCACAAGGTCCTCGTCCAAAACGGCGCTGTCTTCGCCGACCGTCCACCGGCTCCTCCGTTGAGGAAGGTCTTCACCAGCAACCAGCACAGCATCAGCTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGCCGAAATCTCACTTCCCAAATCCTCCATCCCTCTCGGGTCAGGTCCTACGCTCGTGCTCGCAAATGGGTTTTGGATATTCTTCTCACTCGCCTTCCGTCTCTGTCTGAATCTGGAAACCCCGTCCCTGTCGTCGATCATTTTCGGTTCGCCATGTTCTGTTTGTTGGTGTTGATGTGCTTTGGAGATAAGCTTGACGAGTCCCAGATCCGAGAAATCGAGAACGTGGAGCGGGCGATGATGTTGAGTTTTGGGCGTTTCAACGTTCTAAATTTCTGGCCCAAAGTCACCAAGTTTTTGCTCCGGAAACGCTGGGAGGCGTTTCTCCGAATAAGAAGGAACCAAGAGAAAGTCCTAATTCCTTTGATCGAAGCAAGAAGGAAGGCCAAACAAAACAGAGCAAACAGAGGCCAAACTGAAAAAGAAGAAGAAGAAGAAGAATTCGTGGTGTCATATGTGGATACGCTGCTCGATTTGGAGCTCCCAGAAGAGAAGAGAAAGCTTAACGACGAAGAACTTGTCACTTTATGCTCCGAATTTCTCAACGGCGGCACGGATACGACCACCACGGCCTTGCAGTGGATAATGGCGAATTTAGTGAAATACCCAGAAATTCAAAACAAGCTTTATGCAGAGATCAAAGGAGTAATGGGGGATGGAACGAGGGAGGAGGTGAAGGAAGAAGACTTGGGGAAACTTCCATATCTGAAAGCTGTGGTTTTAGAAGGATTGCGAAGACACCCGCCGGCGAATTTTGTGCTACCACACGCGGTGAAAGAAGATACAGAGTTGGGAAATTACATTATACCAAAGAATGGAGGCATAAATTTCATGGTGGCGGAGATGGGTCGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAATTGCAAAGAAGAAGAAGTGGCGTTTGATATAACAGGGAACAAAGAAATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATATGTCCTGGATTTGGTCTGGCAATTCTTCATTTGGAGTATTTCGTTGCCAATTTGGTTTGGAGGTTGGAATGGAAGGCCTTAGATGGAGACGAAATTGATCTGTCGGAGAAGGTAGAACTCACCATTGTGATGAAAAATCCTCTGAAAGCGAACATACAGTCAAGACCGCTTCTTTGTTTGAGCCCCAAAATCATTCCTTACGCATTTGTCGGTAAGTGGTCTACCACATTATCTACAGCCTCCTCCGGTAGTCATTCGTTGGCCGAAACAATAAGCTTCCTCGTTCAAGGTGATAGCTTCTTCCCCCGTGCAAAAGTAGTTTCCCCTCGACGACCGTTTAGCAAAGACCGCTGGTTAAATTCACCAACTGCTTGTGAAATAATCACGAACTATTGCGAACACTACTACTATGGCTACACCGGTATGACTCTGAGACTACTAGAGGCAGGAGACTGGTGGGAGCCTTCAGGAGAATTCTTTGATAGTAGGAGAATGAATGAGATGCCTTTCACCCCACCCCAGGGGTCCTATTTATAG 1920 49.17 MENWFIILVSLCVCSLLSSIFTQFRSSTKLPPGPPSIPIVTTFQWIRKSPLQIQSLLRSFVAEYGPILTLRIGPRPIIFIADHTIAHKVLVQNGAVFADRPPAPPLRKVFTSNQHSISSASYGPLWRLLRRNLTSQILHPSRVRSYARARKWVLDILLTRLPSLSESGNPVPVVDHFRFAMFCLLVLMCFGDKLDESQIREIENVERAMMLSFGRFNVLNFWPKVTKFLLRKRWEAFLRIRRNQEKVLIPLIEARRKAKQNRANRGQTEKEEEEEEFVVSYVDTLLDLELPEEKRKLNDEELVTLCSEFLNGGTDTTTTALQWIMANLVKYPEIQNKLYAEIKGVMGDGTREEVKEEDLGKLPYLKAVVLEGLRRHPPANFVLPHAVKEDTELGNYIIPKNGGINFMVAEMGRDPKVWEDPMAFKPERFMKGGNCKEEEVAFDITGNKEIKMMPFGAGRRICPGFGLAILHLEYFVANLVWRLEWKALDGDEIDLSEKVELTIVMKNPLKANIQSRPLLCLSPKIIPYAFVGKWSTTLSTASSGSHSLAETISFLVQGDSFFPRAKVVSPRRPFSKDRWLNSPTACEIITNYCEHYYYGYTGMTLRLLEAGDWWEPSGEFFDSRRMNEMPFTPPQGSYL 639
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 34286358 34289318 + Maker00000669 Lcy8g0971 639863
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0971 639 Gene3D Cytochrome P450 24 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 FunFam Cytochrome P450 family protein 24 518 - -
Lcy8g0971 639 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0971 639 Pfam Cytochrome P450 31 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0971 639 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 514 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lcy8g0971 639 CDD CYP77_89 63 510 - -
Lcy8g0971 639 Coils Coil 256 276 - -
Lcy8g0971 639 SUPERFAMILY Cytochrome P450 31 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1694 Lcy-Chr10:41339040 Lcy8g0971 Lcy-Chr8:34286358 2.06E-116 dispersed
Lcy3g0535 Lcy-Chr3:20085799 Lcy8g0971 Lcy-Chr8:34286358 7.61E-30 dispersed
Lcy4g0992 Lcy-Chr4:16903934 Lcy8g0971 Lcy-Chr8:34286358 2.37E-26 dispersed
Lcy7g0590 Lcy-Chr7:5283200 Lcy8g0971 Lcy-Chr8:34286358 4.01E-120 dispersed
Lcy8g0971 Lcy-Chr8:34286358 Lcy8g0973 Lcy-Chr8:34339365 0.00E+00 dispersed
Lcy8g0969 Lcy-Chr8:34226094 Lcy8g0971 Lcy-Chr8:34286358 3.04E-261 proximal
Lcy8g0971 Lcy-Chr8:34286358 Lcy8g0972 Lcy-Chr8:34308190 0 tandem
Lcy1g2001 Lcy-Chr1:25201728 Lcy8g0971 Lcy-Chr8:34286358 1.73E-49 wgd
Lcy4g1576 Lcy-Chr4:39793760 Lcy8g0971 Lcy-Chr8:34286358 6.91E-50 wgd
Lcy4g1060 Lcy-Chr4:19586633 Lcy8g0971 Lcy-Chr8:34286358 6.60E-39 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0971 K24184 - csv:101220777 831.247