Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0971 | ATGGAGAACTGGTTCATCATCCTCGTCTCCCTCTGCGTCTGCTCTCTTCTCAGCTCCATTTTTACCCAATTCCGAAGCTCCACCAAGCTTCCACCAGGCCCTCCTTCAATTCCCATCGTCACCACGTTCCAATGGATCCGCAAATCCCCACTCCAAATCCAGTCTCTGCTACGCAGTTTCGTCGCCGAGTACGGCCCCATCCTCACCCTCCGCATCGGCCCCCGCCCCATCATCTTCATCGCCGACCACACCATTGCCCACAAGGTCCTCGTCCAAAACGGCGCTGTCTTCGCCGACCGTCCACCGGCTCCTCCGTTGAGGAAGGTCTTCACCAGCAACCAGCACAGCATCAGCTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGCCGAAATCTCACTTCCCAAATCCTCCATCCCTCTCGGGTCAGGTCCTACGCTCGTGCTCGCAAATGGGTTTTGGATATTCTTCTCACTCGCCTTCCGTCTCTGTCTGAATCTGGAAACCCCGTCCCTGTCGTCGATCATTTTCGGTTCGCCATGTTCTGTTTGTTGGTGTTGATGTGCTTTGGAGATAAGCTTGACGAGTCCCAGATCCGAGAAATCGAGAACGTGGAGCGGGCGATGATGTTGAGTTTTGGGCGTTTCAACGTTCTAAATTTCTGGCCCAAAGTCACCAAGTTTTTGCTCCGGAAACGCTGGGAGGCGTTTCTCCGAATAAGAAGGAACCAAGAGAAAGTCCTAATTCCTTTGATCGAAGCAAGAAGGAAGGCCAAACAAAACAGAGCAAACAGAGGCCAAACTGAAAAAGAAGAAGAAGAAGAAGAATTCGTGGTGTCATATGTGGATACGCTGCTCGATTTGGAGCTCCCAGAAGAGAAGAGAAAGCTTAACGACGAAGAACTTGTCACTTTATGCTCCGAATTTCTCAACGGCGGCACGGATACGACCACCACGGCCTTGCAGTGGATAATGGCGAATTTAGTGAAATACCCAGAAATTCAAAACAAGCTTTATGCAGAGATCAAAGGAGTAATGGGGGATGGAACGAGGGAGGAGGTGAAGGAAGAAGACTTGGGGAAACTTCCATATCTGAAAGCTGTGGTTTTAGAAGGATTGCGAAGACACCCGCCGGCGAATTTTGTGCTACCACACGCGGTGAAAGAAGATACAGAGTTGGGAAATTACATTATACCAAAGAATGGAGGCATAAATTTCATGGTGGCGGAGATGGGTCGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAATTGCAAAGAAGAAGAAGTGGCGTTTGATATAACAGGGAACAAAGAAATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATATGTCCTGGATTTGGTCTGGCAATTCTTCATTTGGAGTATTTCGTTGCCAATTTGGTTTGGAGGTTGGAATGGAAGGCCTTAGATGGAGACGAAATTGATCTGTCGGAGAAGGTAGAACTCACCATTGTGATGAAAAATCCTCTGAAAGCGAACATACAGTCAAGACCGCTTCTTTGTTTGAGCCCCAAAATCATTCCTTACGCATTTGTCGGTAAGTGGTCTACCACATTATCTACAGCCTCCTCCGGTAGTCATTCGTTGGCCGAAACAATAAGCTTCCTCGTTCAAGGTGATAGCTTCTTCCCCCGTGCAAAAGTAGTTTCCCCTCGACGACCGTTTAGCAAAGACCGCTGGTTAAATTCACCAACTGCTTGTGAAATAATCACGAACTATTGCGAACACTACTACTATGGCTACACCGGTATGACTCTGAGACTACTAGAGGCAGGAGACTGGTGGGAGCCTTCAGGAGAATTCTTTGATAGTAGGAGAATGAATGAGATGCCTTTCACCCCACCCCAGGGGTCCTATTTATAG | 1920 | 49.17 | MENWFIILVSLCVCSLLSSIFTQFRSSTKLPPGPPSIPIVTTFQWIRKSPLQIQSLLRSFVAEYGPILTLRIGPRPIIFIADHTIAHKVLVQNGAVFADRPPAPPLRKVFTSNQHSISSASYGPLWRLLRRNLTSQILHPSRVRSYARARKWVLDILLTRLPSLSESGNPVPVVDHFRFAMFCLLVLMCFGDKLDESQIREIENVERAMMLSFGRFNVLNFWPKVTKFLLRKRWEAFLRIRRNQEKVLIPLIEARRKAKQNRANRGQTEKEEEEEEFVVSYVDTLLDLELPEEKRKLNDEELVTLCSEFLNGGTDTTTTALQWIMANLVKYPEIQNKLYAEIKGVMGDGTREEVKEEDLGKLPYLKAVVLEGLRRHPPANFVLPHAVKEDTELGNYIIPKNGGINFMVAEMGRDPKVWEDPMAFKPERFMKGGNCKEEEVAFDITGNKEIKMMPFGAGRRICPGFGLAILHLEYFVANLVWRLEWKALDGDEIDLSEKVELTIVMKNPLKANIQSRPLLCLSPKIIPYAFVGKWSTTLSTASSGSHSLAETISFLVQGDSFFPRAKVVSPRRPFSKDRWLNSPTACEIITNYCEHYYYGYTGMTLRLLEAGDWWEPSGEFFDSRRMNEMPFTPPQGSYL | 639 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 34286358 | 34289318 | + | Maker00000669 | Lcy8g0971 | 639863 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0971 | 639 | Gene3D | Cytochrome P450 | 24 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | FunFam | Cytochrome P450 family protein | 24 | 518 | - | - | |
| Lcy8g0971 | 639 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy8g0971 | 639 | Pfam | Cytochrome P450 | 31 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0971 | 639 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 10 | 514 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lcy8g0971 | 639 | CDD | CYP77_89 | 63 | 510 | - | - | |
| Lcy8g0971 | 639 | Coils | Coil | 256 | 276 | - | - | |
| Lcy8g0971 | 639 | SUPERFAMILY | Cytochrome P450 | 31 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy10g1694 | Lcy-Chr10:41339040 | Lcy8g0971 | Lcy-Chr8:34286358 | 2.06E-116 | dispersed | |
| Lcy3g0535 | Lcy-Chr3:20085799 | Lcy8g0971 | Lcy-Chr8:34286358 | 7.61E-30 | dispersed | |
| Lcy4g0992 | Lcy-Chr4:16903934 | Lcy8g0971 | Lcy-Chr8:34286358 | 2.37E-26 | dispersed | |
| Lcy7g0590 | Lcy-Chr7:5283200 | Lcy8g0971 | Lcy-Chr8:34286358 | 4.01E-120 | dispersed | |
| Lcy8g0971 | Lcy-Chr8:34286358 | Lcy8g0973 | Lcy-Chr8:34339365 | 0.00E+00 | dispersed | |
| Lcy8g0969 | Lcy-Chr8:34226094 | Lcy8g0971 | Lcy-Chr8:34286358 | 3.04E-261 | proximal | |
| Lcy8g0971 | Lcy-Chr8:34286358 | Lcy8g0972 | Lcy-Chr8:34308190 | 0 | tandem | |
| Lcy1g2001 | Lcy-Chr1:25201728 | Lcy8g0971 | Lcy-Chr8:34286358 | 1.73E-49 | wgd | |
| Lcy4g1576 | Lcy-Chr4:39793760 | Lcy8g0971 | Lcy-Chr8:34286358 | 6.91E-50 | wgd | |
| Lcy4g1060 | Lcy-Chr4:19586633 | Lcy8g0971 | Lcy-Chr8:34286358 | 6.60E-39 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0971 | K24184 | - | csv:101220777 | 831.247 |