Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0973 | ATGGAGATTTGGTTCATCGTCCTCGTCTCTCTCTGCATCTGCTCTCTTCTCAGCTCCATTTTTACCCACTTCCGAAGCTCCACCACCCTCCCACCAGGCCCTCCTTCAATTCCCATCGTCTCCGGTTTCCTATGGCTCCGCAGATCCCCCCTCCAAATCGAGTCTCTGCTCCGCAACTTCATCGCCAAATACGGCCCCGTCATGACCCTCCGCATCGGCAACCGCCCCGCCGTTTTCATCGCCGATCGCTCCATTGCCCACAAGGCCCTCCTCCAGAACGGCGCTCTCTTCGCCGACCGTCCACCGGCTCTTCCCTTGGCCAAGATCATCACCAGCAACCAGCACAACATCAGCTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGCCGCAACCTCACGTCCCAAATCCTCCATCCTTCTCGGGTCAAGTCTTACAATCGAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAATCGCCTTCTCTCTCACTCGGAATCGGGAACTCCCGTCCGTGTTGTCGATCATTTTCAGTACGCCATGTTTTGTTTGTTGGTGTTGATGTGCTTCGGTGACAAGCTTGACGAAGCCCAGATTCACGAAATTGAAAGGGTGCATCGAGCTCTGCTGTTAAATTTTGGGCGTTTCAACATCCTCAATTTCTGGCCGAAATTAACCAAGATTTTCCTCCGGAAGCACTGGGAGACGTTTCTCCAACTCAGGATCGAGCAAGAGAAAGTTGTCATCCCTTTGATACAAGCAAAAAGGAAGGCCAGCCAGAACAGAGCAAACAGAGCCGAAACTGAAGAGGAATACGTGGTGTCGTATGTGGACACACTGCTCGATTTGGTGCTTCCCGATGACAACAGAAAGCTTACAGACGACGAGATAGTCACCATATGCTCCGAATTCCTCAACGCCGGCACCGACACGACCTCCACGGCCTTGCAGTGGGTGATGGCGAATTTAGTGAAATACCCAGAAATTCAAAACAAGCTTTATGCAGAGATCAAAGGAGTAATGGGAGATGGATCGGGGGAGGAGGTGAAGGAAGAGGATTTGGGAAAACTTCCATATTTGAAAGCTGTAATTTTGGAAGGATTACGAAGACACCCACCAGGGCATTTCGTGTTGCCACACGCAGTGAAAGAAGATACAGTGCTAGAAAATTATGTGATACCAAAGGATGGGAGCGTAAATTTTATGGTGTCGGAGATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAAAGAAGAAGAAGAAGAAGTGGCGTTTGATATAACAGGGAGCAAGGAGATAAAGATGATGCCATTCGGAGCAGGGAGAAGGATGTGCCCTGGATTTGGTCTGGCAATTCTTCATTTGGAGTATTTCATTGCCAATTTGGTTTGGAGGTTTGAGTGGAAGGCTGTGGATGGAGACGAAGTTGATCTGTCGGAGAAGGTGGAGTTCACTGTCGTGATGGAAAAGCCCCTCAGGGCTAACATTTATGCCAGGTGA | 1536 | 50.59 | MEIWFIVLVSLCICSLLSSIFTHFRSSTTLPPGPPSIPIVSGFLWLRRSPLQIESLLRNFIAKYGPVMTLRIGNRPAVFIADRSIAHKALLQNGALFADRPPALPLAKIITSNQHNISSASYGPLWRLLRRNLTSQILHPSRVKSYNRARKWVLDILLNRLLSHSESGTPVRVVDHFQYAMFCLLVLMCFGDKLDEAQIHEIERVHRALLLNFGRFNILNFWPKLTKIFLRKHWETFLQLRIEQEKVVIPLIQAKRKASQNRANRAETEEEYVVSYVDTLLDLVLPDDNRKLTDDEIVTICSEFLNAGTDTTSTALQWVMANLVKYPEIQNKLYAEIKGVMGDGSGEEVKEEDLGKLPYLKAVILEGLRRHPPGHFVLPHAVKEDTVLENYVIPKDGSVNFMVSEMGWDPKVWEDPMAFKPERFMKGGKEEEEEVAFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFIANLVWRFEWKAVDGDEVDLSEKVEFTVVMEKPLRANIYAR | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 34339365 | 34340900 | - | Maker00001220 | Lcy8g0973 | 639865 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0973 | 511 | Coils | Coil | 251 | 271 | - | - | |
| Lcy8g0973 | 511 | Gene3D | Cytochrome P450 | 24 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 12 | 510 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lcy8g0973 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | Pfam | Cytochrome P450 | 31 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | SUPERFAMILY | Cytochrome P450 | 31 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 296 | 313 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | PRINTS | E-class P450 group I signature | 316 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0973 | 511 | FunFam | Cytochrome P450 family protein | 24 | 511 | - | - | |
| Lcy8g0973 | 511 | CDD | CYP77_89 | 63 | 505 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy12g0096 | Lcy-Chr12:1253301 | Lcy8g0973 | Lcy-Chr8:34339365 | 1.71E-216 | dispersed | |
| Lcy12g0097 | Lcy-Chr12:1258630 | Lcy8g0973 | Lcy-Chr8:34339365 | 2.66E-238 | dispersed | |
| Lcy12g1185 | Lcy-Chr12:23660296 | Lcy8g0973 | Lcy-Chr8:34339365 | 2.38E-46 | dispersed | |
| Lcy3g1455 | Lcy-Chr3:41312466 | Lcy8g0973 | Lcy-Chr8:34339365 | 1.34E-204 | dispersed | |
| Lcy8g0965 | Lcy-Chr8:34116209 | Lcy8g0973 | Lcy-Chr8:34339365 | 2.51E-13 | dispersed | |
| Lcy8g0969 | Lcy-Chr8:34226094 | Lcy8g0973 | Lcy-Chr8:34339365 | 3.36E-274 | dispersed | |
| Lcy8g0971 | Lcy-Chr8:34286358 | Lcy8g0973 | Lcy-Chr8:34339365 | 0.00E+00 | dispersed | |
| Lcy8g0973 | Lcy-Chr8:34339365 | Lcy8g0975 | Lcy-Chr8:34377657 | 8.31E-258 | dispersed | |
| Lcy8g0972 | Lcy-Chr8:34308190 | Lcy8g0973 | Lcy-Chr8:34339365 | 0.00E+00 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0973 | K24184 | - | csv:101204559 | 821.231 |