Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy8g0975 | ATGGAAGCTCTCCTCCGCAGCGCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATAGGCCCTCGCCCCTCCATCTTCATCGCCGACCGCACCATTGCCCACAAGGCCCTCCTCCAGAACGGCGCTCTCTTCGCCGACCGTCCACCGGCTCCGACCAAAATCCTCTCCAGCAACCAGCACAGCATCAACTCCGCCCCTTACGGCCCTCTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGCGTCAAATCCTACGGTCGTGCTCGCAAGTGGGTTTCGGATATCCTTATCAATCGCCTTCTCTCTCACTCTGAATCCGGAACTCCCGTCTGCGTTGTCGATCATTTTCAGTACGCTATGTTTTGTCTGTTGGTGTTGATGTGCTTTGGGGATAAGCTTGACGAACCCCAAATTAAAGAAGTCGAGAACGTGCAGCGTGCGAAGCTTTTAAATTTCAGGCGTTTTGGTCTCCTCAATTTATGGCCTAAATTGACCAAGATTTTTCTTCCAAACCGCTGGGAGGAGTTTCTCCAACTGAGAAGGAACCAGGAGAGAGTCGTAATACCTCTAATCGAAGCAAGAAGGAAGGCCAAGCAAAACAGAGAAAACAGAGCAAACAGAGCAAATAGAGAAGGTGAAGAAGAAGAAGAAGAATTCGTGTTGTCATATGTGGATACGCTCCTCGATTTACAGCTCCCCGAGGAGGAGAACAGAAACCTAACAGACGGCGAAATGGTCACTCTATGCTCCGAGTTCCTCACCGGCGGCACGGATACGACCTCCACGACCTTGCAGTGGACAATGGCCAATCTAGTGAAATACCCAGAAATTCAAAACAAGCTTTACGCAGAGATGAGAGGAGTAATGGGAGATGGGTCAGAGGAGGAAGTGAAGGAAGAGGATTTGGGGAAGCTTCCATATTTGAAAGCCGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGGGCATTTCCTACAACCACGAGCAGTGAAGGAGGACATACAATTCGAAAATTACGTGATCCCCAAAAACGGGACTGTAAATTTCTTGGTGGCGGAGATGGGTCGGGACCCAGAAGTGTGGGAAGATCCGATGGTGTTTAAGCCGGAGAGGTTCATGATCATGAAGGGCGGCGGCGGCGGAGAAGGAGTGGCGGCGTTTGATGTAACAGGGAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGTCCAGGATACGGGTTGGGGATTCTTCATTTGGAATATTTCATAGCGAATCTGGTATGGAGGTTTGAATGGAAGGCTGTGGATGGGGATAATGTTGATCTCTCGGAGAAGATTGAATTCACTTTTGTCATGGAAAAGCCTCTCAAAGCCAACATAACTTCGAGTTTCCTTCCTCCAAGTTCGAAGGCAAATCTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTACAAGTGAAGTTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAACTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTAG | 1638 | 50.49 | MEALLRSAVAKYGPIVTLRIGPRPSIFIADRTIAHKALLQNGALFADRPPAPTKILSSNQHSINSAPYGPLWRLLRRNLTSQILHPSRVKSYGRARKWVSDILINRLLSHSESGTPVCVVDHFQYAMFCLLVLMCFGDKLDEPQIKEVENVQRAKLLNFRRFGLLNLWPKLTKIFLPNRWEEFLQLRRNQERVVIPLIEARRKAKQNRENRANRANREGEEEEEEFVLSYVDTLLDLQLPEEENRNLTDGEMVTLCSEFLTGGTDTTSTTLQWTMANLVKYPEIQNKLYAEMRGVMGDGSEEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFLQPRAVKEDIQFENYVIPKNGTVNFLVAEMGRDPEVWEDPMVFKPERFMIMKGGGGGEGVAAFDVTGSKEIKMMPFGAGRRICPGYGLGILHLEYFIANLVWRFEWKAVDGDNVDLSEKIEFTFVMEKPLKANITSSFLPPSSKANLVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGN | 545 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 34377657 | 34380233 | - | Maker00001211 | Lcy8g0975 | 639867 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy8g0975 | 545 | Coils | Coil | 198 | 225 | - | - | |
| Lcy8g0975 | 545 | CDD | CYP77_89 | 11 | 462 | - | - | |
| Lcy8g0975 | 545 | PRINTS | E-class P450 group I signature | 271 | 297 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | E-class P450 group I signature | 404 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | E-class P450 group I signature | 9 | 28 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | E-class P450 group I signature | 251 | 268 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | E-class P450 group I signature | 33 | 54 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | E-class P450 group I signature | 414 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | Gene3D | Cytochrome P450 | 1 | 469 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | SUPERFAMILY | Cytochrome P450 | 5 | 466 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | FunFam | Cytochrome P450 family protein | 1 | 469 | - | - | |
| Lcy8g0975 | 545 | PRINTS | P450 superfamily signature | 414 | 425 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | P450 superfamily signature | 317 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | P450 superfamily signature | 405 | 414 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | PRINTS | P450 superfamily signature | 262 | 279 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | Pfam | Cytochrome P450 | 7 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy8g0975 | 545 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 407 | 416 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy8g0975 | 545 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 465 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy11g0638 | Lcy-Chr11:16531234 | Lcy8g0975 | Lcy-Chr8:34377657 | 2.53E-30 | dispersed | |
| Lcy11g0643 | Lcy-Chr11:16633224 | Lcy8g0975 | Lcy-Chr8:34377657 | 6.81E-84 | dispersed | |
| Lcy8g0972 | Lcy-Chr8:34308190 | Lcy8g0975 | Lcy-Chr8:34377657 | 8.12E-251 | dispersed | |
| Lcy8g0973 | Lcy-Chr8:34339365 | Lcy8g0975 | Lcy-Chr8:34377657 | 8.31E-258 | dispersed | |
| Lcy8g0975 | Lcy-Chr8:34377657 | Lcy8g0278 | Lcy-Chr8:8225270 | 6.34E-48 | dispersed | |
| Lcy8g0975 | Lcy-Chr8:34377657 | Lcy8g0976 | Lcy-Chr8:34414012 | 2.65E-146 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy8g0975 | K24184 | - | csv:105434706 | 728.783 |