Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0975 ATGGAAGCTCTCCTCCGCAGCGCCGTCGCCAAATACGGCCCCATCGTCACCCTCCGCATAGGCCCTCGCCCCTCCATCTTCATCGCCGACCGCACCATTGCCCACAAGGCCCTCCTCCAGAACGGCGCTCTCTTCGCCGACCGTCCACCGGCTCCGACCAAAATCCTCTCCAGCAACCAGCACAGCATCAACTCCGCCCCTTACGGCCCTCTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCCCGCGTCAAATCCTACGGTCGTGCTCGCAAGTGGGTTTCGGATATCCTTATCAATCGCCTTCTCTCTCACTCTGAATCCGGAACTCCCGTCTGCGTTGTCGATCATTTTCAGTACGCTATGTTTTGTCTGTTGGTGTTGATGTGCTTTGGGGATAAGCTTGACGAACCCCAAATTAAAGAAGTCGAGAACGTGCAGCGTGCGAAGCTTTTAAATTTCAGGCGTTTTGGTCTCCTCAATTTATGGCCTAAATTGACCAAGATTTTTCTTCCAAACCGCTGGGAGGAGTTTCTCCAACTGAGAAGGAACCAGGAGAGAGTCGTAATACCTCTAATCGAAGCAAGAAGGAAGGCCAAGCAAAACAGAGAAAACAGAGCAAACAGAGCAAATAGAGAAGGTGAAGAAGAAGAAGAAGAATTCGTGTTGTCATATGTGGATACGCTCCTCGATTTACAGCTCCCCGAGGAGGAGAACAGAAACCTAACAGACGGCGAAATGGTCACTCTATGCTCCGAGTTCCTCACCGGCGGCACGGATACGACCTCCACGACCTTGCAGTGGACAATGGCCAATCTAGTGAAATACCCAGAAATTCAAAACAAGCTTTACGCAGAGATGAGAGGAGTAATGGGAGATGGGTCAGAGGAGGAAGTGAAGGAAGAGGATTTGGGGAAGCTTCCATATTTGAAAGCCGTGGTTTTGGAAGGATTAAGAAGACACCCACCAGGGCATTTCCTACAACCACGAGCAGTGAAGGAGGACATACAATTCGAAAATTACGTGATCCCCAAAAACGGGACTGTAAATTTCTTGGTGGCGGAGATGGGTCGGGACCCAGAAGTGTGGGAAGATCCGATGGTGTTTAAGCCGGAGAGGTTCATGATCATGAAGGGCGGCGGCGGCGGAGAAGGAGTGGCGGCGTTTGATGTAACAGGGAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGTCCAGGATACGGGTTGGGGATTCTTCATTTGGAATATTTCATAGCGAATCTGGTATGGAGGTTTGAATGGAAGGCTGTGGATGGGGATAATGTTGATCTCTCGGAGAAGATTGAATTCACTTTTGTCATGGAAAAGCCTCTCAAAGCCAACATAACTTCGAGTTTCCTTCCTCCAAGTTCGAAGGCAAATCTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTACAAGTGAAGTTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAACTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTAG 1638 50.49 MEALLRSAVAKYGPIVTLRIGPRPSIFIADRTIAHKALLQNGALFADRPPAPTKILSSNQHSINSAPYGPLWRLLRRNLTSQILHPSRVKSYGRARKWVSDILINRLLSHSESGTPVCVVDHFQYAMFCLLVLMCFGDKLDEPQIKEVENVQRAKLLNFRRFGLLNLWPKLTKIFLPNRWEEFLQLRRNQERVVIPLIEARRKAKQNRENRANRANREGEEEEEEFVLSYVDTLLDLQLPEEENRNLTDGEMVTLCSEFLTGGTDTTSTTLQWTMANLVKYPEIQNKLYAEMRGVMGDGSEEEVKEEDLGKLPYLKAVVLEGLRRHPPGHFLQPRAVKEDIQFENYVIPKNGTVNFLVAEMGRDPEVWEDPMVFKPERFMIMKGGGGGEGVAAFDVTGSKEIKMMPFGAGRRICPGYGLGILHLEYFIANLVWRFEWKAVDGDNVDLSEKIEFTFVMEKPLKANITSSFLPPSSKANLVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTTVVTTPAGN 545
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 34377657 34380233 - Maker00001211 Lcy8g0975 639867
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0975 545 Coils Coil 198 225 - -
Lcy8g0975 545 CDD CYP77_89 11 462 - -
Lcy8g0975 545 PRINTS E-class P450 group I signature 271 297 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS E-class P450 group I signature 9 28 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS E-class P450 group I signature 251 268 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS E-class P450 group I signature 33 54 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 Gene3D Cytochrome P450 1 469 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 SUPERFAMILY Cytochrome P450 5 466 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 FunFam Cytochrome P450 family protein 1 469 - -
Lcy8g0975 545 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS P450 superfamily signature 317 328 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 PRINTS P450 superfamily signature 262 279 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 Pfam Cytochrome P450 7 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0975 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0975 545 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 465 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0638 Lcy-Chr11:16531234 Lcy8g0975 Lcy-Chr8:34377657 2.53E-30 dispersed
Lcy11g0643 Lcy-Chr11:16633224 Lcy8g0975 Lcy-Chr8:34377657 6.81E-84 dispersed
Lcy8g0972 Lcy-Chr8:34308190 Lcy8g0975 Lcy-Chr8:34377657 8.12E-251 dispersed
Lcy8g0973 Lcy-Chr8:34339365 Lcy8g0975 Lcy-Chr8:34377657 8.31E-258 dispersed
Lcy8g0975 Lcy-Chr8:34377657 Lcy8g0278 Lcy-Chr8:8225270 6.34E-48 dispersed
Lcy8g0975 Lcy-Chr8:34377657 Lcy8g0976 Lcy-Chr8:34414012 2.65E-146 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0975 K24184 - csv:105434706 728.783