Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g0976 ATGTTTTTTGAACTCAGAAGGAATCAAGATAAAGTCCTCATCCCTTTGATCGAAGCAAGAAGGAAGGCCAACCAAAACAGAGCAAACAGAGTAAACAGAGCAGAAGGAGAAGAAGAGGATGAAGAATTTGTTTTGTCATATGTGGATACGCTTCTCGATTTGGAGCTCCCCGACGAGAACAGAAAGCTTACTGATGAAGAAATGGTCACCATAGCCTCCGAGTTCCTCAACGCCGGCACCGACACCACCTCCACGGCCCTGCAGTGGATGATGGCGAATTTAGTGAAATACCCAGAAATTCAAAACAAACTTTTCGCAGAGATCAAAGGAGTAATGGGGGATAGATCAGGGGAGGAAGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATTTGAAAGCTTTGGTTTTGGAAGGATTGCGAAGACACCCACCAGCGCATTTCGTGTTACCACACGCAGTGAAAGAAGATACGAATCTTGAAAACTATGTGATACCAAAGAATGGAACTGTGAATTTCATGGTGGCGGAGATGGGTTGGGATCCGGAACTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCAAAGAAGAAGAAGAAGAAGTGGCGTTTGATATAACAGGGAGCAAAGAAATAAAGATGATGCCGTTTGGAGCAGGGAGAAGGATATGTCCTGGATTTGGTCTGGCGATTCTTCATTTGGAATATTTCATTGCAAATTTGGTATGGAGGTTTGAATGGAAAGCCTTAGACGGAGACGATGTTGATCTGTCGGAGAAGGTGGAGTTCACCGTCGTGATGGAAAAGCCTCTGAAGGCCAAAATAATTTCAAGGTTTTAA 855 44.91 MFFELRRNQDKVLIPLIEARRKANQNRANRVNRAEGEEEDEEFVLSYVDTLLDLELPDENRKLTDEEMVTIASEFLNAGTDTTSTALQWMMANLVKYPEIQNKLFAEIKGVMGDRSGEEEVKEEDLGKLPYLKALVLEGLRRHPPAHFVLPHAVKEDTNLENYVIPKNGTVNFMVAEMGWDPELWEDPMAFKPERFMKGGKEEEEEVAFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFIANLVWRFEWKALDGDDVDLSEKVEFTVVMEKPLKAKIISRF 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34414012 34414866 - Maker00001227 Lcy8g0976 639868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g0976 284 Pfam Cytochrome P450 6 275 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 280 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lcy8g0976 284 PRINTS E-class P450 group I signature 67 84 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS E-class P450 group I signature 133 151 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS E-class P450 group I signature 219 229 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS E-class P450 group I signature 174 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS E-class P450 group I signature 87 113 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS E-class P450 group I signature 229 252 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 222 231 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy8g0976 284 Gene3D Cytochrome P450 1 284 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS P450 superfamily signature 229 240 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS P450 superfamily signature 78 95 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS P450 superfamily signature 134 145 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 PRINTS P450 superfamily signature 220 229 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy8g0976 284 SUPERFAMILY Cytochrome P450 3 283 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g0976 Lcy-Chr8:34414012 Lcy12g1728 Lcy-Chr12:37997692 1.92E-43 dispersed
Lcy8g0975 Lcy-Chr8:34377657 Lcy8g0976 Lcy-Chr8:34414012 2.65E-146 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g0976 K24184 - csv:101204559 449.514