Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1009 ATGAAGGTTCTTCCTCAATGGGCTACGGTAGGATTTTCAGCTGCAACAGGTAAATTTTCAGAGCGACATTTGCTATTTTCTTGGGAATTCAACTCGAGCTTGGAAATAAAACAACCAGGTGAAAATAATGGGAAAAAAGTTGATAAAATTGTGGGTCTCACAGTTTCACTTGGAGTTTTCATTATTATTATGGCGATAATAGCATTCGTGGTGTTTTGGAGATTGAAGCAAAAGAAACGAAAAGCAGGACCAGAAAACCTTGAGGAAGTAAACTTGACATCCATTAACGATGACTTGGAAAGAGGGGTCGGACCGAGGAGTTTTTCTCACAAGCTTCTTGCCATGGCCACCAACAATTTCTCAGACGAGAGGAAGCTTGGCCAAGGAGGATTTGGTGCAGTGTACAGAGGGCACATACCAGATATAGATTTGACTGTAGCTGTGAAGAAAATCTCAAGGAGTTCTAAACAAGGAAGAAAAGAGTACATAACTGAGGTGAAGATCATTAGTAGGCTTCGCCATCGCAATTTGGTGCAACTCATAGGTTGGTGCCATGAGAAGGGCGAGTTCTTGCTAGTTTATGAATTCATGCCTAATGGTAGTCTTGATTCTCATCTCTTTGGCAAGAGAAACCCCCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCCTCTGCTTTGTTGTATCTCCACGAAGAATGGGAACAATGCGTGGTTCATAGAGATATTAAATCTAGCAATGTCATGTTAGACTCAAACTTCAATGTCAAGCTTGGAGATTTTGGGCTGGCTCGATTAATGGACCATGAATTGGGTGCTCAAACAACTGGATTGGTAGGAACTTTGGGCTACTTAGCTCCGGAATACATAAGCACAGGCAGAGCCAGTAAAGAATCTGATGTGTTTAGCTTTGGAGTGGTTGCTTTAGAGATTGCAACTGGAAGAATGTCGAGAACCTCCATGGAAAAGGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGAAGTGGACAGTTGCTTGAGGGTGTGGATGAGAAATTGCATTCAGATTTTGACAAAAAACAGGTGGAATGTTTGATGGTTGTTGGACTATGGAGTGCTTATCCGGACCCTAATCTTCGACCTTCGATAAAACAAGCAATTCAAGTTCTTAACTTTGAGACAACGACGCCAAATCTTCCAAGTAAAATGCCTGTTCCTACGTATCATGCTCCTCCCACATCGATGAGCTCGAATGAACCTTCCATTACTGTAAGTCTTGACATGGGTCGTTGA 1290 42.17 MKVLPQWATVGFSAATGKFSERHLLFSWEFNSSLEIKQPGENNGKKVDKIVGLTVSLGVFIIIMAIIAFVVFWRLKQKKRKAGPENLEEVNLTSINDDLERGVGPRSFSHKLLAMATNNFSDERKLGQGGFGAVYRGHIPDIDLTVAVKKISRSSKQGRKEYITEVKIISRLRHRNLVQLIGWCHEKGEFLLVYEFMPNGSLDSHLFGKRNPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRTSMEKESHKGLVEWVWDLYGSGQLLEGVDEKLHSDFDKKQVECLMVVGLWSAYPDPNLRPSIKQAIQVLNFETTTPNLPSKMPVPTYHAPPTSMSSNEPSITVSLDMGR 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35159353 35161530 - Maker00001086 Lcy8g1009 639901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1009 429 FunFam Lectin-domain containing receptor kinase A4.3 197 409 - -
Lcy8g1009 429 ProSiteProfiles Protein kinase domain profile. 120 398 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1009 429 Pfam Protein kinase domain 121 386 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1009 429 ProSitePatterns Protein kinases ATP-binding region signature. 126 150 IPR017441 GO:0005524(InterPro)
Lcy8g1009 429 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 140 IPR013320 -
Lcy8g1009 429 CDD STKc_IRAK 126 390 - -
Lcy8g1009 429 Gene3D Transferase(Phosphotransferase) domain 1 197 410 - -
Lcy8g1009 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1009 429 MobiDBLite consensus disorder prediction 407 429 - -
Lcy8g1009 429 FunFam L-type lectin-domain containing receptor kinase IX.1 105 196 - -
Lcy8g1009 429 MobiDBLite consensus disorder prediction 409 423 - -
Lcy8g1009 429 Pfam Legume lectin domain 2 43 IPR001220 GO:0030246(InterPro)
Lcy8g1009 429 SMART serkin_6 120 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1009 429 Gene3D - 1 57 - -
Lcy8g1009 429 PANTHER - 9 399 IPR050528 GO:0005886(PANTHER)
Lcy8g1009 429 SUPERFAMILY Protein kinase-like (PK-like) 104 412 IPR011009 -
Lcy8g1009 429 Gene3D Phosphorylase Kinase; domain 1 105 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g1009 Lcy-Chr8:35159353 Lcy8g1018 Lcy-Chr8:35418596 5.07E-276 dispersed
Lcy8g1009 Lcy-Chr8:35159353 Lcy8g1013 Lcy-Chr8:35248209 7.21E-304 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66107 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1009 - - - 0.0