Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1015 ATGGCTACTTTATTATTCTACGTCGTTCCAATGCTACTAAGTCATGTCCTTCTCTTTCTCTTTCTCCTTCTCCATCTTCCTCTCTCTGTCGTCTCAGTTTCTTTCAAAATCAACGCATTCAATTCCATTGATAACCAAATACTTTACCAGGGAGACGCAGTTCTTTCCGGTGGAAATATTTTACTCAGCGGCCCTAATTCTTATTCTCATGTCGGCCGAGCCATTTACAAAGATTCTGTGCCGATTTGGGACTCCGAAACAGGAAAAGTCACCGATTTCTCGACCCATTTCACCTTCACGATCGATACTCAAAATAGAACGAAATATGGCTGTGGAATTGCTTTTTTCTTAGCTCCAGCTGGGTCTCAAATCCCCACAAACTCGGCCGGTGGGTACCTTGGCCTTTACAACAAGGCGTACAGGAACAGACCCAGAAACCAAATCGTTCATGTCGAGTTTGATTCTGACGTAAATTATAACTGGGATCCTCCATTTCAACATGTGGGCATAAACGTCAACTCCATTTCTTCTTCTAATTACACTGCTTGGAATGCCAGCTTACACAGTCGTGATGTTGCCGATGTGTGGATTTCCTACAATTCAACCGCCAAGCACTTGAGTGTCTCGTGGAATTACCGAAACACGTCGAACTCGTTTCGAAATACTAGCCTGAGTTTCCAGATTGATCTAAAGGCGATTCTTCCCCAGTGGGTGGATGTTGGATTTTCAGGCGCAACGGGTGCAAATTTAGAGAGACATACGATATCTTCATGGGAGTTCAACTCTAGTTTGGACATAAAGCAAACGAGTCAAAATAATGATAATGGGAACAAAGTTAATGTATTTGTAGGCGTAGCGGTTTCAGTTGGAGTTTTCATTATCGTGGCAATGGTAGTATTTGTAGTGCTTTGGAGGTTGAGGCAAGGGAAAAGGAAATTAGCAGAAGAAGGGAATCTTGAGGAAGTGAATTTGACCTTCATTAACGATGATTTGGAAAGAGGGGTTGGACCGAGAAGGTTTTCTCACAAGCTTCTTGCCATGGCCACCAACAACTTCTCAAACGAAAGGAAGTTGGGCGAAGGAGGATCCGGTGCAGGAAGAAAAGAGTACATAACTGAAGTGAAGATCATTAGTAGGCTTCGCCATCGAAATTTGGTGCAGCTCATAGGTTGGTGCCATGATAAAGGTGAGTTCTTGTTAGTTTATGAATTCATGTCCAATGGTAGCCTTGATTCTCATCTCTTTGGCAAGAGAAACCCTCTTGCTTGGGCTGTGAGATATAAGATTGCTTTAGGTTTAGCATCTGCGCTGTTATATCTTCATGAAGAATGGGAACAATGTGTGGTTCATAGAGATATTAAATCTAGCAATGTCATGTTAGATTCAAACTTCAACGTCAAGCTTGGAGATTTTGGACTAGCTCGATTGATGGACCATGAGTTGGGTCCTCAAACAACTGGGTTGGTGGGAACTTGGGGCTACTTAGCACCAGAATATATAAGTACAGGTAGAGTCGGTAAAGAATCTGATGTGTTTAGCTTTGGAGTAGTTGCTTTGGAGATTGCCACTGGAAGAATGTCGAGAACCTCCATGGAAAAGGAATCTCATAAGGGTTTAGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGAGAGTTGTTTGTGGGCATAGATGAAAAATTGCAGTCTGATTTGTTAGAAAATTGTGGAAGACAAGTATGA 1719 42.52 MATLLFYVVPMLLSHVLLFLFLLLHLPLSVVSVSFKINAFNSIDNQILYQGDAVLSGGNILLSGPNSYSHVGRAIYKDSVPIWDSETGKVTDFSTHFTFTIDTQNRTKYGCGIAFFLAPAGSQIPTNSAGGYLGLYNKAYRNRPRNQIVHVEFDSDVNYNWDPPFQHVGINVNSISSSNYTAWNASLHSRDVADVWISYNSTAKHLSVSWNYRNTSNSFRNTSLSFQIDLKAILPQWVDVGFSGATGANLERHTISSWEFNSSLDIKQTSQNNDNGNKVNVFVGVAVSVGVFIIVAMVVFVVLWRLRQGKRKLAEEGNLEEVNLTFINDDLERGVGPRRFSHKLLAMATNNFSNERKLGEGGSGAGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMSNGSLDSHLFGKRNPLAWAVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGPQTTGLVGTWGYLAPEYISTGRVGKESDVFSFGVVALEIATGRMSRTSMEKESHKGLVEWVWDLYGSGELFVGIDEKLQSDLLENCGRQV 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35306008 35307791 + Maker00000812 Lcy8g1015 639907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1015 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1015 572 SUPERFAMILY Protein kinase-like (PK-like) 335 560 IPR011009 -
Lcy8g1015 572 Gene3D - 31 287 - -
Lcy8g1015 572 PANTHER - 50 563 IPR050528 GO:0005886(PANTHER)
Lcy8g1015 572 FunFam L-type lectin-domain containing receptor kinase IX.1 31 273 - -
Lcy8g1015 572 FunFam Lectin-domain containing receptor kinase A4.3 405 570 - -
Lcy8g1015 572 ProSitePatterns Legume lectins alpha-chain signature. 234 243 IPR000985 -
Lcy8g1015 572 Gene3D Phosphorylase Kinase; domain 1 350 405 - -
Lcy8g1015 572 CDD lectin_legume_LecRK_Arcelin_ConA 33 264 IPR001220 GO:0030246(InterPro)
Lcy8g1015 572 Gene3D Transferase(Phosphotransferase) domain 1 406 572 - -
Lcy8g1015 572 Pfam Protein kinase domain 368 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1015 572 FunFam ABL protein 367 408 - -
Lcy8g1015 572 ProSiteProfiles Protein kinase domain profile. 300 572 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1015 572 SMART serkin_6 352 565 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1015 572 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 265 IPR013320 -
Lcy8g1015 572 Pfam Legume lectin domain 33 274 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g1015 Lcy-Chr8:35306008 Lcy8g1018 Lcy-Chr8:35418596 2.52E-295 dispersed
Lcy8g1014 Lcy-Chr8:35298430 Lcy8g1015 Lcy-Chr8:35306008 2.77E-80 tandem
Lcy8g1015 Lcy-Chr8:35306008 Lcy8g1016 Lcy-Chr8:35349781 4.31E-297 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66109 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1015 - - - 0.0