Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1016 ATGGTGGCACGACTTCACGACGAGGCTGAGGCATGGCGGGACAACAGGGAGGGCGGCGACACTGATGCTGACTGCCATTTTCTTCTTGTTCTTTTTCTCTATCTTCCGCTCTCAGTTGATTCAATTTCTCTCAAACTAGATCGTTTTGAGCCCAATGGAAAGAATATTCTCTATCAAGGAGATGCAATTCCTTCTGTTGGAACAATTGTACTTAGTGACCCAAATTACTACTGTCACGTTGGTCGAGCCATTTACAAAGATATCGTCCCAATTTGGGACTCTAAAACAGGGAAAGCCACTGATTTCTCGACCCATTTCAGCTTCACCATCGATACACGAGGTGCGCGGAAATATGGCCATGGGGTTGCTTTTTTCTTAGCGCCGGCCGGGTTTCAAATCCCTACGAACTCGGGTGGGGGGTTTCTTGGCCTTTTCAATAAGACGTACAGTGATTCTTCAAGAAACCAAATTGTTCATGTTGAATTTGATTCCTTTAAGAATAGTGATTGGGATCCTCCATTTGAACATGTGGGCATCAACATTAACTCAGTTCATTCCGCTATTCACACGCCTTGGAACGCAAGCTTACACAGTGGAGACGTTGCTAATGTGTGGATCTCCTACAATTCAACCACAAAAAACTTGAGCGTCTCTTGGAAATACAACAAGACATCGGATTTGTTTGAAAAATCCAGCCTGGATTACCAGGTTGATCTTACGAAGATTCTTCCCCAATGGGCGATGATGGGATTTTCTGCTGCAACTGGTGCGAATTTAGAGAAACATATTCTATTTTCATGGGAATTCAACTCGAGCTTGGATATAAAGCAGACAAGTGACGAAAATAATGGGAAAAAAGTTGGCATAGTTGTGGCTGTAGCTGTTTCTATTGGAGGACTGGCTATCATGGCAATAATAGTATTTGGAATACTTTGGAGGTCGAAGCGAAATACAAGAAAAGAAGAAAAACTAGAAAGACTTGAGGAAGTAAACTTGACATCCATTAACGATGATTTGGAAAGAGGGGTCGGACCGAGGAGGTTTTCTCACGAGCTTCTTGCCATGGCCACCAACAATTTCTCAGATGAGAGGAAGCTTGGCCAAGGAGGATTTGGTGCAGTGTATAAAGGGCGCATACCAGATATAGATTTGAGTGTAGCTGTAAAGAAAATCTCAAGGGGTTCTAAACAAGGAAGAAAAGAGTACATAACTGAGGTGAAGATCATCAGTAGGCTTCGACATCGAAATTTGGTGCAACTCATAGGTTGGTGCCATGAGAAGGGCGAGTTCTTGTTAGTTTATGAATTCATGCCTAATGGTAGTCTTGATTCTCATCTCTTTGGTAGGAGATGCCCTCTTGCATGGGCTGTGAGATATAAGATTGCTATAGGTTTAGCATGTGCGTTGTTATATCTTCATGAAGAATGGGAACAGTGCGTGGTTCATAGAGATATTAAATCTAGCAATGTCATGTTAGACTCAAACTTCAACGTCAAGCTTGGAGATTTTGGGCTGGCTCGATTGATGGACCATGAGTTGGGTCCTCAAACAACTGGGTTGGTGGGAACTTGGGGCTACTTAGCACCAGAATATATAAGTACAGGTAGAGCCAGTAAAGAATCTGATGTGTTTAGCTTTGGAGTGGTTGCTTTAGAGATTGCAACTGGAAGAATGTCGAGAAACTCCATGGACGAGGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGAAGTGGACAGTTGCTTGAGGGTGTTGATGAGAAATTGCAATCTAATTGTGACAAAAAACAGGTGGAATGTTTGATGGTTGTTGGACTGTGGAGTGCTTATCCGGACCCTAATCTTCGACCTTCAATAAAACAAGCAATTCAAGTTCTTAATTTTGAGACAATGATGCCAAATCTTCCAAGTAAAATGCCTGTTCCTACATACCATGCTCCTCCCGTATCGACAAGCTCAAATGAACCTTCCATTACCGCAAGTCTTGATATGGGTCGTTGA 2010 42.79 MVARLHDEAEAWRDNREGGDTDADCHFLLVLFLYLPLSVDSISLKLDRFEPNGKNILYQGDAIPSVGTIVLSDPNYYCHVGRAIYKDIVPIWDSKTGKATDFSTHFSFTIDTRGARKYGHGVAFFLAPAGFQIPTNSGGGFLGLFNKTYSDSSRNQIVHVEFDSFKNSDWDPPFEHVGININSVHSAIHTPWNASLHSGDVANVWISYNSTTKNLSVSWKYNKTSDLFEKSSLDYQVDLTKILPQWAMMGFSAATGANLEKHILFSWEFNSSLDIKQTSDENNGKKVGIVVAVAVSIGGLAIMAIIVFGILWRSKRNTRKEEKLERLEEVNLTSINDDLERGVGPRRFSHELLAMATNNFSDERKLGQGGFGAVYKGRIPDIDLSVAVKKISRGSKQGRKEYITEVKIISRLRHRNLVQLIGWCHEKGEFLLVYEFMPNGSLDSHLFGRRCPLAWAVRYKIAIGLACALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGPQTTGLVGTWGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRNSMDEESHKGLVEWVWDLYGSGQLLEGVDEKLQSNCDKKQVECLMVVGLWSAYPDPNLRPSIKQAIQVLNFETMMPNLPSKMPVPTYHAPPVSTSSNEPSITASLDMGR 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35349781 35353142 - Maker00001252 Lcy8g1016 639908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1016 669 Pfam Protein kinase domain 361 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1016 669 CDD lectin_legume_LecRK_Arcelin_ConA 42 273 IPR001220 GO:0030246(InterPro)
Lcy8g1016 669 ProSiteProfiles Protein kinase domain profile. 360 638 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1016 669 FunFam L-type lectin-domain containing receptor kinase IX.1 40 282 - -
Lcy8g1016 669 SMART serkin_6 360 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1016 669 MobiDBLite consensus disorder prediction 648 669 - -
Lcy8g1016 669 Pfam Legume lectin domain 44 283 IPR001220 GO:0030246(InterPro)
Lcy8g1016 669 Gene3D - 39 287 - -
Lcy8g1016 669 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Lcy8g1016 669 ProSitePatterns Protein kinases ATP-binding region signature. 366 390 IPR017441 GO:0005524(InterPro)
Lcy8g1016 669 FunFam Lectin-domain containing receptor kinase A4.3 437 649 - -
Lcy8g1016 669 FunFam L-type lectin-domain containing receptor kinase IX.1 345 436 - -
Lcy8g1016 669 SUPERFAMILY Protein kinase-like (PK-like) 344 650 IPR011009 -
Lcy8g1016 669 Gene3D Transferase(Phosphotransferase) domain 1 437 650 - -
Lcy8g1016 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 275 IPR013320 -
Lcy8g1016 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1016 669 CDD STKc_IRAK 366 630 - -
Lcy8g1016 669 PANTHER - 71 639 IPR050528 GO:0005886(PANTHER)
Lcy8g1016 669 MobiDBLite consensus disorder prediction 649 663 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g1091 Lcy-Chr6:12244161 Lcy8g1016 Lcy-Chr8:35349781 2.60E-226 dispersed
Lcy8g1016 Lcy-Chr8:35349781 Lcy9g0283 Lcy-Chr9:7252774 4.96E-93 dispersed
Lcy8g1016 Lcy-Chr8:35349781 Lcy8g1018 Lcy-Chr8:35418596 0 proximal
Lcy8g1015 Lcy-Chr8:35306008 Lcy8g1016 Lcy-Chr8:35349781 4.31E-297 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66110 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1016 - - - 0.0