Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1018 ATGTCAAGTCCTCTCCTTTTCCTTCTTCTCCTTCTTTACTTTCTTCCAGTCTCTATTGACTCAGTTTCTTTCAAAATAGATCGGTTCAAGTCCAATGAAAGCGATACACTTTACCAAGGAGATGCCATTCCTTCTGTTGGAGCAGTCGAATTCAACAATATTAACTACCTCTGTCGTGTCGGTTGGGTTATCTACAAGGATATCGTTCCGATTTGGGATTATAAAACAGGAAAAGCCACTGATTTCACGTCCCATTTCACCTTTTCAATCGATACTCGAACTGCAACAAACTACGGCCATGGAGTGGCTTTCTTTCTAGCTCCAGCTGGGTTTCAAATCCCTCCCAACTCAGCTGGTGGATTTCTTGGCCTTTTCAACACCACCAACAGTGACTCGACCATCAACCAGATCGTTCACGTGGAGTTCGATTCTTTCTCCAATCAAGAATGGGATCCTCCGTTTGAACATGTGGGCATAAACGTTAACTCGATTGCTTCTTCTAATTACACTCGTTGGAATGCCAGTTCACACAGTGGGGACGTTGCCGATGCGTGGATCTCCTACAATTCAACTACAAAAAACTTGAGCGTTTCGTGGAAGTACCAAAATTCATCCAACTCGTTTCAAAATTCCACCTTGAGTTACCAGATTGATCTTGTGAAGGTTCTTCCCCAATGGGCGACCGTGGGATTCTCAGCTGCAACTGGTATGTATGTAGAGAGACATACGTTATTTTCTTGGGAGTTCAACTCGAGCTTGGATGTGAAGCAAATGAGTGAAGATAACGGGAATAAAGTGAATATAATTGTGGGTGTGACCGTTTCGATAGGAGTTTTAATTCTCATGGCAGTAGTAGGATTTGTAGTGCTTTGGAGATTAAAGCAAAAGAGAAGAAAATCAGAAGAAAACGTTGATGAGGTAAACTTGACGTCCATTAACGATGATTTGGAAAGAGGGGTTGGACCCAGAAGGTTTTCTCGCAAGCTTCTTGCCATGGCCACCAACAACTTCTCAAACGAAAGGAAGCTGGGTGAAGGAGGATTTGGTGCAGTGTACAGAGGGTACGTACCAGATTTGGATTTGACAATAGCTGTGAAGAAAATCTCAAGGGGTTCGAGACAGGGAAGAAAAGAATACATAACTGAGGTGAAGATCATTAGTAGGCTTCGCCATCGCAATTTGGTTCAACTCATTGGTTGGTGTCATGATAAAGGTGAGTTCTTGCTTGTTTATGAATTCATGCCTAATGGTAGCCTTGATTCTCATCTCTTTGGCAAGAGAAACCCTCTTTCTTGGGCTGTGAGATATAAGGTTGCTTTAGGTTTAGCCTCTGCGTTGCTATATCTTCACGAGGAATGGGAACAATGCGTGGTTCATAGAGATATTAAATCCAGCAATGTCATGTTAGACTCGAACTTCAATGTGAAGCTTGGAGATTTTGGGCTGGCTCGATTGATGGACCATGAGTTGGGTGCTCAAACAACTGGATTGGTAGGAACTTTGGGCTACTTAGCTCCTGAATACATAAGCACAGGTAGAGCCAGTAAAGAATCTGATGTGTTTAGCTTTGGAGTGGTTGCTTTAGAGATTGCAACTGGAAGAATGTCGAGAAACTCCATGGAAGAGGAATCTCATAAGGGTTTGGTGGAGTGGGTTTGGGATCTTTATGGGAGTGGAAAGCTTCTTATGGGTATGGATGAGAAACTGCAGTCTGATTATGATAAAAAGCAAGTGGAGTGTTTGATGCTCGTTGGACTTTGGAGTGCTTATCCAGACCCTAATCTCAGACCTTCAATAAGACAAGTGATTCAAGTTCTTAATTTTGAGACGACGATGCCAAATCTTCCAAGTAAAATGCCGGTTGCTGTGTATCATGCTCCTTCTACGTCGATGAGCTCAAATGAACCTTCAATTACTGTAAGTCTCGACGTGGGTCGTTGA 1941 42.86 MSSPLLFLLLLLYFLPVSIDSVSFKIDRFKSNESDTLYQGDAIPSVGAVEFNNINYLCRVGWVIYKDIVPIWDYKTGKATDFTSHFTFSIDTRTATNYGHGVAFFLAPAGFQIPPNSAGGFLGLFNTTNSDSTINQIVHVEFDSFSNQEWDPPFEHVGINVNSIASSNYTRWNASSHSGDVADAWISYNSTTKNLSVSWKYQNSSNSFQNSTLSYQIDLVKVLPQWATVGFSAATGMYVERHTLFSWEFNSSLDVKQMSEDNGNKVNIIVGVTVSIGVLILMAVVGFVVLWRLKQKRRKSEENVDEVNLTSINDDLERGVGPRRFSRKLLAMATNNFSNERKLGEGGFGAVYRGYVPDLDLTIAVKKISRGSRQGRKEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMPNGSLDSHLFGKRNPLSWAVRYKVALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMDHELGAQTTGLVGTLGYLAPEYISTGRASKESDVFSFGVVALEIATGRMSRNSMEEESHKGLVEWVWDLYGSGKLLMGMDEKLQSDYDKKQVECLMLVGLWSAYPDPNLRPSIRQVIQVLNFETTMPNLPSKMPVAVYHAPSTSMSSNEPSITVSLDVGR 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35418596 35420536 - Maker00000411 Lcy8g1018 639910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1018 646 FunFam L-type lectin-domain containing receptor kinase IX.1 322 413 - -
Lcy8g1018 646 Pfam Protein kinase domain 338 604 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1018 646 Gene3D Transferase(Phosphotransferase) domain 1 414 628 - -
Lcy8g1018 646 SUPERFAMILY Protein kinase-like (PK-like) 321 628 IPR011009 -
Lcy8g1018 646 FunFam L-type lectin-domain containing receptor kinase IX.1 20 262 - -
Lcy8g1018 646 PANTHER - 48 616 IPR050528 GO:0005886(PANTHER)
Lcy8g1018 646 Gene3D Phosphorylase Kinase; domain 1 322 413 - -
Lcy8g1018 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1018 646 Gene3D - 19 268 - -
Lcy8g1018 646 SMART serkin_6 337 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1018 646 CDD TM_EGFR-like 268 301 - -
Lcy8g1018 646 CDD STKc_IRAK 343 607 - -
Lcy8g1018 646 ProSitePatterns Protein kinases ATP-binding region signature. 343 367 IPR017441 GO:0005524(InterPro)
Lcy8g1018 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 255 IPR013320 -
Lcy8g1018 646 CDD lectin_legume_LecRK_Arcelin_ConA 22 253 IPR001220 GO:0030246(InterPro)
Lcy8g1018 646 FunFam Lectin-domain containing receptor kinase A4.3 414 626 - -
Lcy8g1018 646 ProSiteProfiles Protein kinase domain profile. 337 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1018 646 Pfam Legume lectin domain 22 261 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g1088 Lcy-Chr6:12194738 Lcy8g1018 Lcy-Chr8:35418596 5.63E-209 dispersed
Lcy8g1009 Lcy-Chr8:35159353 Lcy8g1018 Lcy-Chr8:35418596 5.07E-276 dispersed
Lcy8g1013 Lcy-Chr8:35248209 Lcy8g1018 Lcy-Chr8:35418596 0 dispersed
Lcy8g1014 Lcy-Chr8:35298430 Lcy8g1018 Lcy-Chr8:35418596 7.52E-88 dispersed
Lcy8g1015 Lcy-Chr8:35306008 Lcy8g1018 Lcy-Chr8:35418596 2.52E-295 dispersed
Lcy8g1018 Lcy-Chr8:35418596 Lcy9g0283 Lcy-Chr9:7252774 6.49E-89 dispersed
Lcy8g1016 Lcy-Chr8:35349781 Lcy8g1018 Lcy-Chr8:35418596 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66111 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1018 - - - 0.0