Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy8g1182 | ATGAAACAACCCCGCAAACGCACTTCGCCAAGTGCCATCGTTCTCTTTCAATCACGCTCTCTTCCTGAAACCTTCACCGGAGAAAAACAAAAACCAAAAACAAGAATGTCACCGGAGACGTCGAAAAGCAACAAGATCCGCCGCATTGTCCGGCTCCGCCAAATGCTACAACACTGGCGCAAGAAGGCACGCGCGGCCTCCTCCAGAGCACCGCCGTCCGACGTCCCCGCAGGTCACGTCGCCGTCTGCGTCGGCAGCGGCTGCCGCCGATTCATCGTCCGCGCGACCTTCCTGAACCATCCGATCTTCCGGAAGCTGCTATCGCAGGCCGAAGAAGAATACGGCTTCGCTACGCGAGGTCCTCTGGCGCTTCCGTGCGACGAATCGGTCTTCGAGGAGGTCCTCCGAGTCGTCGCTCGCTCCGAGTTGAGTAACTCCTCGCGAAATCCGAATCTCAAGGATTTGCAGAGGCGATGCGATGAAGATGTCAGAAAGAACCTCGAGTTCTTAGGCGAATCGAGACCTTTACTGTATGGATTAGCCGATAATAAATCCGTCTGTTGA | 564 | 55.67 | MKQPRKRTSPSAIVLFQSRSLPETFTGEKQKPKTRMSPETSKSNKIRRIVRLRQMLQHWRKKARAASSRAPPSDVPAGHVAVCVGSGCRRFIVRATFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVLRVVARSELSNSSRNPNLKDLQRRCDEDVRKNLEFLGESRPLLYGLADNKSVC | 187 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 38272764 | 38273327 | + | Maker00001451 | Lcy8g1182 | 640074 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy8g1182 | 187 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 52 | 138 | IPR003676 | GO:0009733(InterPro) | |
Lcy8g1182 | 187 | MobiDBLite | consensus disorder prediction | 10 | 25 | - | - | |
Lcy8g1182 | 187 | Pfam | Auxin responsive protein | 51 | 137 | IPR003676 | GO:0009733(InterPro) | |
Lcy8g1182 | 187 | MobiDBLite | consensus disorder prediction | 26 | 43 | - | - | |
Lcy8g1182 | 187 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy3g0944 | Lcy-Chr3:32870227 | Lcy8g1182 | Lcy-Chr8:38272764 | 1.57E-61 | dispersed | |
Lcy9g1752 | Lcy-Chr9:42724008 | Lcy8g1182 | Lcy-Chr8:38272764 | 1.63E-17 | transposed | |
Lcy3g2326 | Lcy-Chr3:50133264 | Lcy8g1182 | Lcy-Chr8:38272764 | 1.25E-21 | transposed | |
Lcy8g1182 | Lcy-Chr8:38272764 | Lcy9g2251 | Lcy-Chr9:47027801 | 8.32E-61 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy8g1182 | K14488 | - | csv:101222974 | 260.766 |