Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1257 TTTGAAATTCCAGCATCCTCTCTAAAGGTTTCGTATCCTATTCTCTGTCGCTTTCTTTACGATTGTCGAATCGCCTCCTTGATTCTTTGCCGTTCAGTTGCTTTTCTTCTTGCTGTAGAGGCAAAATTAGTGTTCCTCAAGCCTCGTAGGCTGTTATCTACAATGGAAGACGGCGAGCTTGAATCCTCGAATCCAGAAGTGTTTTCGAGTTCGAATGCCGTTGAGATTCCAAGCAGTTGCTCGATGGATAGTTTCTTTGATGAAATTCTGAAGGATACTCATGCTTGCACACACGCTCATACTTGCAACCCTCCTGGTCCTGATTATTCACATACGCACACCTGTTTTCATGTCCATACTAAAATTGTCTCCTCCCCCACTGAAGAAAAGGTTTCCACTGACGACACAGCAGAGTCTGTGGATAAAAAGACTAAGAAACGCCCGCTAGGTAATCGTGAAGCAGTTCGTAAATACCGTGAGAAGAAAAAGGCGAGGGCTGCATCATTGGAAGATGAAGTTGTGAGGTTGAGGGCCTTGAATCAGCAACTGTTGAAGAGATTGCAAGGTCAGGCTGCATTGGAGGCTGAGATTTCCAGGCTCAAATGTTTGCTTGTGGATATTAGGGGAAGAATTGAAGGGGAGATTGGAACATTTCCATATCAGAAATCAGCCAATTCAAATCTGCCTAGCCAAAATGTCCCTGGTAGTTACGTGATAAATCCATGTAATGTGCAGTGCAATGATCAGGCGTATTGCCTCCATTCAGGGGCCGATGGAAAAAGTGGGGAGAGCGTTTTGTTGGATGGGCAAAGTTTTAGTGCTTGTGACTTTGAAAATCTTCAATGCTTGGCAAATCAAAACACTGGAGCAAAGGAACTTCCTGACTGTGGATTAGGAGACACAATTTCTAACATTAATTGCTCCGACTTAAATCAGAAGAAAGGTGAAACCTGA 954 43.71 FEIPASSLKVSYPILCRFLYDCRIASLILCRSVAFLLAVEAKLVFLKPRRLLSTMEDGELESSNPEVFSSSNAVEIPSSCSMDSFFDEILKDTHACTHAHTCNPPGPDYSHTHTCFHVHTKIVSSPTEEKVSTDDTAESVDKKTKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQQLLKRLQGQAALEAEISRLKCLLVDIRGRIEGEIGTFPYQKSANSNLPSQNVPGSYVINPCNVQCNDQAYCLHSGADGKSGESVLLDGQSFSACDFENLQCLANQNTGAKELPDCGLGDTISNINCSDLNQKKGET 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 39148727 39150094 + Maker00000442 Lcy8g1257 640149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1257 317 SMART brlzneu 138 206 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Lcy8g1257 317 MobiDBLite consensus disorder prediction 127 151 - -
Lcy8g1257 317 FunFam Basic leucine zipper 24 129 207 - -
Lcy8g1257 317 PANTHER CCAAT/ENHANCER BINDING PROTEIN 55 231 IPR031106 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER)
Lcy8g1257 317 Pfam Basic region leucine zipper 141 188 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Lcy8g1257 317 Coils Coil 152 186 - -
Lcy8g1257 317 MobiDBLite consensus disorder prediction 131 151 - -
Lcy8g1257 317 Gene3D - 129 207 - -
Lcy8g1257 317 SUPERFAMILY Leucine zipper domain 143 188 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Lcy8g1257 317 CDD bZIP 144 198 - -
Lcy8g1257 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 188 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
20511 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1257 K25785 - csv:101219501 486.878