Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy8g1367 | ATGCCAGCTGAAAATTCAATTCCATTTGATCGAGATGCAGAGCCTTTTGTTGAGGTTGATCCAACTGGAAGGTTTGGACGATACGATGATCTTCTTGGGTCTGGAGCGGTGAAGAAAGTTTATAGGGCATTTGATCAGGAGGAAGGTATAGAGGTTGCTTGGAATCAGGTCCGATTGAGAAATTTTAGTGGAGATCCAGTGTTCATCAACCGCTTGAGATCTGAGGTTCAGCTGCTGAGCACGTTAAACAACAAATATATCATTGTTTGTTACAGTGTTTGGAATGATGATGAGCGTAATACGTTGAATTTCATTACGGAGGTGTGCACATCAGGAAATCTGAGGGATTATCGTAAGAAACATCGACATGTGTCAATTAAGGCCTTGAAGAAGTGGTCAAAGCAGGTACTCGAGGGATTGGATTATCTTCATACTCATGAGCCTTGCATTATTCACAGAGATCTCAACTGCAGCAACATATTTGTCAATGGGAACATTGGCCAGGTTAAAATAGGTGATCTAGGTTTTGCAGCTATAGTTGGAAGGAGTCATGCTGCACATTCAATCATAGGCACACCAGAGTATATGGCACCAGAGCTGTATGAGGAAGATTACACGGAGATGGTGGACATATACTCCTTCGCGATGTGTTTGCTCGAGATGGTTACAACGGAGATACCATACAGTGAATGTGATAGTGTTGCCAAGATATACAAGAAGGTGACAACTGGAATAAAGCCCCAAGCACTAAACAAAGTGACTGACGATGAAGTCAGGGCTTTCATTGAGAAGTGCATTGCACAACCAAGGGCGAGGCCTTCCGCTTCTGAACTTCTCAAGGACCCTTTCTTTGATGAAGTCAGGGATGAAGATTCTGAACAGACTTATTAA | 891 | 42.87 | MPAENSIPFDRDAEPFVEVDPTGRFGRYDDLLGSGAVKKVYRAFDQEEGIEVAWNQVRLRNFSGDPVFINRLRSEVQLLSTLNNKYIIVCYSVWNDDERNTLNFITEVCTSGNLRDYRKKHRHVSIKALKKWSKQVLEGLDYLHTHEPCIIHRDLNCSNIFVNGNIGQVKIGDLGFAAIVGRSHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFAMCLLEMVTTEIPYSECDSVAKIYKKVTTGIKPQALNKVTDDEVRAFIEKCIAQPRARPSASELLKDPFFDEVRDEDSEQTY | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 40408986 | 40411930 | + | Maker00001047 | Lcy8g1367 | 640259 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy8g1367 | 296 | CDD | STKc_WNK | 24 | 284 | - | - | |
Lcy8g1367 | 296 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 15 | 286 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Lcy8g1367 | 296 | SUPERFAMILY | Protein kinase-like (PK-like) | 19 | 285 | IPR011009 | - | |
Lcy8g1367 | 296 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 290 | - | - | |
Lcy8g1367 | 296 | FunFam | probable serine/threonine-protein kinase WNK9 | 109 | 290 | - | - | |
Lcy8g1367 | 296 | Pfam | Protein kinase domain | 30 | 284 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy8g1367 | 296 | Gene3D | Phosphorylase Kinase; domain 1 | 10 | 107 | - | - | |
Lcy8g1367 | 296 | ProSiteProfiles | Protein kinase domain profile. | 26 | 284 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy8g1367 | 296 | FunFam | Probable serine/threonine-protein kinase WNK1 | 11 | 107 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy8g1367 | Lcy-Chr8:40408986 | Lcy8g1692 | Lcy-Chr8:43517851 | 1.34E-109 | dispersed | |
Lcy8g1367 | Lcy-Chr8:40408986 | Lcy6g1698 | Lcy-Chr6:32416849 | 4.36E-163 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66120 | None | None | None | None | Lcy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy8g1367 | K08867 | - | csv:101222153 | 592.423 |