Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1463 ATGGCACCAACAACAGAAGAGGAACTGAAATTAAGATTATTCTCAGGTGACCTTTCTCAGTTAGGTCCAGCAGAACGGTTCCTCAAAGTGTTGGTGGACATTCCTTTTGCTTTCAAACGATTAGAGTGTCTTCTCTTCATGCTCTCATTGTCGGAAGAAGTCACCACCATTAAAGAATCATTCGCAACTCTAGAGGTCGCTTGCAACAAACTCAGAAACAGCAGGCTATTTCTCAAGCTATTAGAAGCAGTTCTCAAAACTGGCAATCGAATGAACGATGGGACGTACCGTGGCGGTGCTCAGGCGTTTAAGCTCGACACTCTCTTGAAACTGGCGGATGTTAAAGGAACCGACGGCAAGACTTCGCTCTTACACTTCGTCCTACAGGAGATTATTCGTTCGGAAGGCATACGAGCAGCCCGCTCTGACAGACAGAGCCGGAGTTTGTCCAGCGTAACCTCCGCCGATACGATTCCTGAGGAATCCGCCGACGATTCAGCGGAACATTATCGGCAATTAGGCCTTCAGGTCATTACTGGTTTGAGTACGGAGCTCCAGGACGTTAAAAGAGCGGCAGCCATAGATGCGGAAGGGCTAACGACAACGATATCGAAACTTGGGCAGTCTATGTTGAGAACCAAAGGATTTATAAACGCCGAGATGAAGAGTTTAGACGAAGACAGCAAATTCCACCAATCGCTGTCGAAATTTTTGGAAGGAGCAGAAGCGGATATTTTGTGGATTTCAGGGGAAGAAAAGAAGATAATGGCACTGGTGAGGAGCACAGTGGATTACTTCCATGGAAATTCTGGAAAGGACGAAGGATTGAGATTGTTTACGATCGTACGTGATTTTCTGATTGTGTTAGACAAGACATGTAAACAGGTTAAAGATGCGGCTGCAGCGGCTGCAGCAGCGGCAAAGCAAGCGAAGAATTCCAAAAAAGAAACTCCAACATTGTCGGCTACTAATCAGCGGGATGATCTACGGCAGCGGCTATTTCCGGCGATTGCAGAGCGACGGATGGGCGAGTATTCTAGTTCTTCGGACGACGACGAGGACGACGAGAGTTCATCTTCATCATCCTAG 1089 47.29 MAPTTEEELKLRLFSGDLSQLGPAERFLKVLVDIPFAFKRLECLLFMLSLSEEVTTIKESFATLEVACNKLRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLADVKGTDGKTSLLHFVLQEIIRSEGIRAARSDRQSRSLSSVTSADTIPEESADDSAEHYRQLGLQVITGLSTELQDVKRAAAIDAEGLTTTISKLGQSMLRTKGFINAEMKSLDEDSKFHQSLSKFLEGAEADILWISGEEKKIMALVRSTVDYFHGNSGKDEGLRLFTIVRDFLIVLDKTCKQVKDAAAAAAAAAKQAKNSKKETPTLSATNQRDDLRQRLFPAIAERRMGEYSSSSDDDEDDESSSSSS 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41277213 41278378 + Maker00000521 Lcy8g1463 640355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1463 362 PANTHER FORMIN-RELATED 1 352 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Lcy8g1463 362 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 315 IPR015425 -
Lcy8g1463 362 MobiDBLite consensus disorder prediction 311 330 - -
Lcy8g1463 362 MobiDBLite consensus disorder prediction 338 362 - -
Lcy8g1463 362 Gene3D Formin, FH2 domain 1 327 IPR042201 -
Lcy8g1463 362 MobiDBLite consensus disorder prediction 348 362 - -
Lcy8g1463 362 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 314 - -
Lcy8g1463 362 Pfam Formin Homology 2 Domain 1 288 IPR015425 -
Lcy8g1463 362 SMART it6_source 1 332 IPR015425 -
Lcy8g1463 362 MobiDBLite consensus disorder prediction 312 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g1463 Lcy-Chr8:41277213 Lcy9g1230 Lcy-Chr9:36767636 4.89E-132 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1463 K28090 - csv:101206094 553.518