Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1492 ATGGAAGACAAAGAGAGTAGCAGTTGTCACCGTTTCATGATCTCCAATTTGTGCATCTTGCTTTTACTATTATCTTCTTCCTCCGTAGACAGTGTCGACATATTAAGAGACAGAGACAGTAATGGAGATTCTGTTGTCTCGGAGGGAGGAAGATTTGAGCTTGGTTTTTTCACTCCAAAGGGAAGCTCAGACGCCAGAAGATACGTTGGAATATGGTACTACGCTTCGGAACCTCAGATCGTTGTATGGGTTGCAAACAGAGACCAACCCCTCTCCAACAAAAATGGAATTTTCGCCATTACAGATGGAAACCTCAAGGTGTTGGCATCAGACGGAACTTCTTTATGGTCAACATCCCTACAGACCTCTTCTAACAACGCAACAATGGTGCTGATGCCTTCTGGGAATTTAATTCTCAAGGAATTAGGAGTCAACGGCACAACTCTGTGGCAGAGCTTCCAAAATCCAGCCGATACATTTCTTCCGGGCATGAACATGACCGACGACTTGAAGTTGACTTCTTGGAAAAGTGCAGATGACCCGTCGCCTGGGAATTTCACGTTTCTCAAGGACACGGGAAGCCGCTACATCATCGAGAGACTTAGTGAACAGTATTGGGTGAACAGGGAACTCTGGCAAAATTACTCCTCGGAAGCTGATGAAACGATTGCTGATAAAGTCATATTCTACTTGTCAAAAATCAGTGTTGCTGACTTGAAGGCCAACAACTACAACGTTCGTTTTCAAAATCAGGACCTGGATTACAACTACACAAGGGCAGTTATGAATTTCAACGGGCAGATACAGTACCTTGCGAGGAACAGAGCGAGTGGAAAATGGGATGGCATCTGGTTTGAACCTGAAAACAGATGTAGTGTGGTAGCAGCTTGTGGAACCTTCGCTAGCTGTCGGAGTGATACTAAACACACTTGCAGGTGCTTGCCTGGGTTTGAGCCCAAGTCCAAGGATGAGTGGGATTCTGGTGATTACTCACATGGGTGCCAGAGAAAAACAGAAATTTGCCTCAGAGATGTGGCTCAGACTCGAGATTTCGTGAAAATATCTATGAAGGTAAGGAAGACATCTAATATCGCCAAGGCTGATGATAATAAGAGTTGCAGAACCAAGTGCCTTGAATCTTGTACATGTCAAGCGTATACAGAACTAACAACCAATAATAGAAGCGACGGTTCTGTCGCATGTGTCATTTGGGATGATGAACTCCAATCCATTTGGGAAGATGCAGATGGTGGTGGTGATGTTAACGTCCGCTTCAAACTTTCTGATATTGAATATACAGAGCTCGACTGTGAGGCATGCGGAAGCAACATCGTCCCTTATCCTCTGAGCACAGATTCCGACTGCGGTGATCCAATGTATCGTAACTTCACTTGTTCCAGCAGCGAGGTCTTATTTAAGTCGGCGGGTGTTTCCTACAATGTCACCAACATCGATCCACAACTAAAGACTTTTACCATTGCAACTAGCGGGTCTGTGTGCAGAGGTAATGATACTAATGCAATTGAAAAGCTACTGAAATTGGAACACTCGTCTACATTCAAAGTAAGCAGCGGCTGTGACTCTGAATTTAACGAAATTGACATTCAATGGGAGAAACCACTTGAGCCAATCTGCAATTCACCAAAAGATTGCACCAATTGGAAGAATTCATCATGCAACTCATCAACGGATGGAACAAAGAGGTGTTTGTGCAATCCTTCTTTTGAATGGACTGGCACTGACTGCCATATTCCATCAGAGGATGGTTTGAATCGGCCACCTCCAAAACAGAGAAATATCAGAGTTGGTATCATTGTCCCAGTGACCATTGCCGGATTGATTGTTATTTCCTCCTTGGTGTTGTATATTTACTACAAAAGAAGGAAGCTACAAAATCAAAAAGTGCAAAGAGCAGGTTTTTGGGGAAATCGGGAAACTACACACTTGTATGAAAGTGAGAAACGTGTCAAAGACTTCATCGGTTCAGGAATGTTTGGAGAAGATGATAGAAAAGCCATAGAAGTACCCGTTTTTGGTTTAGAAACCATACTCAGTGCTACAGACAACTTCTCTGAAGCAAACAAAATTGGACGTGGAGGATTTGGGACAGTTTACAAGGGCTTTTTTCCAGGAGGACTGGAAATTGCGATAAAGAGGCTGTCCCAAGGTTCCTCCCAAGGCGTAGACGAGTTTAAGAATGAGGCTATTCTCATCGCAAAACTTCAGCATCGAAATCTCGTTAGACTTCTGGGCTATTGTGTTGATGGAGAAGAAAAAATGTTGATCTATGAATATATGCCCAACAAAAGCTTAGACTATTTTATATTTGGCAAGAAAATTTTCCGAACTCTTTCTTATCTTTTGCTAGATCGAACACAATGTTTACTGGTGAACTGGGAGATGCGATTTAACATCATCGTGGGGATTGTTCGAGGGCTAGTTTATCTCCACGAAGATTCAAGGTTGAGGATTATTCATAGAGATTTGAAAACAAGCAATGTTCTATTGGACGGGGAAATGAATCCTAAAATTTCGGACTTTGGTTTAGCAAGAATCTTTGATGGCAAACAAACAGAGGCAATCACCAACAGAGTTGTTGGAACTTATGGATACATGTCACCAGAGTATGCGTTGGATGGATCATTCTCAGTCAAATCTGATGTGTTCAGTTTTGGTATAGTTGCGCTGGAGATTGTTAGTGGAAGAAGGAACACTGGCTTCTACCAATCGAAAGAGGCCTTGAACCTTCTTGGATACGTATGGAAACTGTGGAGAGAAAAAGGAGCATTGGAAATAGCAGAGGCGGGCATACGAGAAAGCTGCAATCCAAGTGAAGTTGTAAAATGTGTGGCTGTGGGGTTGCTGTGTGTACAAGAAGATCCCAACGATCGTCCAACCATGTCCAATGTAGCTTTTATGCTAAGCTCTGGTAGTGATCCTTCTTCTCTTCCAAATCCTAAACAGCCAGCTTTCGTTGATAAAAGATCAACTCCTTCCACTTCTTCTGCAACTTCTTCTTCGGGGTTTAAGCAAGAATTAGTAAGCAATGATGTTAGCTTACTTCAGCCTCGCTAG 3075 42.93 MEDKESSSCHRFMISNLCILLLLLSSSSVDSVDILRDRDSNGDSVVSEGGRFELGFFTPKGSSDARRYVGIWYYASEPQIVVWVANRDQPLSNKNGIFAITDGNLKVLASDGTSLWSTSLQTSSNNATMVLMPSGNLILKELGVNGTTLWQSFQNPADTFLPGMNMTDDLKLTSWKSADDPSPGNFTFLKDTGSRYIIERLSEQYWVNRELWQNYSSEADETIADKVIFYLSKISVADLKANNYNVRFQNQDLDYNYTRAVMNFNGQIQYLARNRASGKWDGIWFEPENRCSVVAACGTFASCRSDTKHTCRCLPGFEPKSKDEWDSGDYSHGCQRKTEICLRDVAQTRDFVKISMKVRKTSNIAKADDNKSCRTKCLESCTCQAYTELTTNNRSDGSVACVIWDDELQSIWEDADGGGDVNVRFKLSDIEYTELDCEACGSNIVPYPLSTDSDCGDPMYRNFTCSSSEVLFKSAGVSYNVTNIDPQLKTFTIATSGSVCRGNDTNAIEKLLKLEHSSTFKVSSGCDSEFNEIDIQWEKPLEPICNSPKDCTNWKNSSCNSSTDGTKRCLCNPSFEWTGTDCHIPSEDGLNRPPPKQRNIRVGIIVPVTIAGLIVISSLVLYIYYKRRKLQNQKVQRAGFWGNRETTHLYESEKRVKDFIGSGMFGEDDRKAIEVPVFGLETILSATDNFSEANKIGRGGFGTVYKGFFPGGLEIAIKRLSQGSSQGVDEFKNEAILIAKLQHRNLVRLLGYCVDGEEKMLIYEYMPNKSLDYFIFGKKIFRTLSYLLLDRTQCLLVNWEMRFNIIVGIVRGLVYLHEDSRLRIIHRDLKTSNVLLDGEMNPKISDFGLARIFDGKQTEAITNRVVGTYGYMSPEYALDGSFSVKSDVFSFGIVALEIVSGRRNTGFYQSKEALNLLGYVWKLWREKGALEIAEAGIRESCNPSEVVKCVAVGLLCVQEDPNDRPTMSNVAFMLSSGSDPSSLPNPKQPAFVDKRSTPSTSSATSSSGFKQELVSNDVSLLQPR 1024
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41570728 41574712 - Maker00000527 Lcy8g1492 640384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1492 1024 Gene3D - 36 154 IPR036426 -
Lcy8g1492 1024 SMART blect_4 36 156 IPR001480 -
Lcy8g1492 1024 Pfam PAN-like domain 356 410 IPR003609 -
Lcy8g1492 1024 CDD B_lectin 40 156 IPR001480 -
Lcy8g1492 1024 Gene3D Transferase(Phosphotransferase) domain 1 766 984 - -
Lcy8g1492 1024 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 181 IPR036426 -
Lcy8g1492 1024 MobiDBLite consensus disorder prediction 992 1024 - -
Lcy8g1492 1024 Gene3D Phosphorylase Kinase; domain 1 663 765 - -
Lcy8g1492 1024 Pfam Protein tyrosine and serine/threonine kinase 693 971 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1492 1024 SMART serkin_6 690 973 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1492 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1492 1024 ProSiteProfiles PAN/Apple domain profile. 341 428 IPR003609 -
Lcy8g1492 1024 ProSiteProfiles Protein kinase domain profile. 690 991 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1492 1024 Pfam S-locus glycoprotein domain 238 321 IPR000858 GO:0048544(InterPro)
Lcy8g1492 1024 CDD STKc_IRAK 696 974 - -
Lcy8g1492 1024 ProSitePatterns Protein kinases ATP-binding region signature. 696 718 IPR017441 GO:0005524(InterPro)
Lcy8g1492 1024 SUPERFAMILY Protein kinase-like (PK-like) 674 974 IPR011009 -
Lcy8g1492 1024 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 655 765 - -
Lcy8g1492 1024 MobiDBLite consensus disorder prediction 975 1024 - -
Lcy8g1492 1024 ProSiteProfiles Bulb-type lectin domain profile. 30 152 IPR001480 -
Lcy8g1492 1024 Pfam D-mannose binding lectin 81 171 IPR001480 -
Lcy8g1492 1024 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 989 - -
Lcy8g1492 1024 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 766 981 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy4g1810 Lcy-Chr4:44124214 Lcy8g1492 Lcy-Chr8:41570728 7.89E-07 dispersed
Lcy8g1492 Lcy-Chr8:41570728 Lcy5g1798 Lcy-Chr5:40718351 2.94E-75 dispersed
Lcy8g1492 Lcy-Chr8:41570728 Lcy8g1494 Lcy-Chr8:41591552 5.70E-164 proximal
Lcy8g1492 Lcy-Chr8:41570728 Lcy8g1493 Lcy-Chr8:41583021 1.17E-248 tandem
Lcy13g0347 Lcy-Chr13:3901720 Lcy8g1492 Lcy-Chr8:41570728 1.66E-06 transposed
Lcy1g0983 Lcy-Chr1:8666382 Lcy8g1492 Lcy-Chr8:41570728 2.56E-06 wgd
Lcy4g0596 Lcy-Chr4:7167896 Lcy8g1492 Lcy-Chr8:41570728 0 wgd
Lcy8g1492 Lcy-Chr8:41570728 Lcy9g1246 Lcy-Chr9:36981648 9.64E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66122 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1492 - - - 0.0