Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1698 ATGGCAATTACTACTTCTCACTCTCCAAAAAATGTGGTGATTCTAGCTTTAGCGTTGCACCTTTTCCTTTTCATGGGCAGCTCTTCCGCCCAACTCTCTACCTCCTTCTACTCCAAGACCTGTCCCAAGCTCCTCTCCACGGTCCGCTCGGGCGTCCAATCTGCCATCGCTAAGGAAACCCGCATCGGGGCTTCCCTCCTCCGTCTGCATTTTCATGATTGCTTTGTTAACGGATGTGATGGGTCAATTCTTTTGGCCGACACTCCAAGTTTCAGAGGAGAACAAACAGCTCCTCCAAACAATAGGTCCGTAAGAGGCTTTAACGTCGTAGAAGCTATCAAGAGGACTGTGGAAAAAGTTTGCCCTGGTGTTGTCTCATGTGCTGATATTTTGACTCTTACTGCTCGTGACTCTGTCGTCATATTGGGAGGGCCATATTGGGAGGTGAAACTAGGAAGAAGAGATTCAAAAACAGCTAGCTTCTCTGCAGCCAGCAGTGGCGTAATCCCTCCACCGACTTCAACCCTCAGCAACCTCATCAATCGATTCAGTGCCTTGGGCCTCTCTGCCAGAGACATGGTTGCCTTGTCTGGGGCCCACACAATAGGCCTAGCAAGGTGCACAACCTTTAGGAATCGCATATACAATGAGACCAACATAGATGCTTCCTTTGCCAAGCTAAGACAGAGCAATTGTCCGAGAAGTGGAGGAGATGACAATCTTGCCCCTCTAGACGTTGCGACGCCAAAGCTTTTCGACAACCATTACTACAAGAACCTTTTGAACAAGAAGGGTCTACTCCACTCCGACCAGATCCTCCACAACGGTGGATCCACTGATTCGTTGGTCGAATTGTACAGTAAAAATGATAAGACTTTCGATGCTGACTTTGTGGCAGCAATGATTAGAATGGGAGACATCCGACCGCTCACAGGATCTCAGGGCGAGATTAGAAAGGTCTGCAGCAAACCCAACTGA 978 48.67 MAITTSHSPKNVVILALALHLFLFMGSSSAQLSTSFYSKTCPKLLSTVRSGVQSAIAKETRIGASLLRLHFHDCFVNGCDGSILLADTPSFRGEQTAPPNNRSVRGFNVVEAIKRTVEKVCPGVVSCADILTLTARDSVVILGGPYWEVKLGRRDSKTASFSAASSGVIPPPTSTLSNLINRFSALGLSARDMVALSGAHTIGLARCTTFRNRIYNETNIDASFAKLRQSNCPRSGGDDNLAPLDVATPKLFDNHYYKNLLNKKGLLHSDQILHNGGSTDSLVELYSKNDKTFDADFVAAMIRMGDIRPLTGSQGEIRKVCSKPN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43551438 43553298 - Maker00000296 Lcy8g1698 640590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1698 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lcy8g1698 325 Gene3D - 36 322 - -
Lcy8g1698 325 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 PANTHER PEROXIDASE 72-RELATED 21 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 FunFam Peroxidase 170 304 - -
Lcy8g1698 325 ProSiteProfiles Plant heme peroxidase family profile. 31 325 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 SUPERFAMILY Heme-dependent peroxidases 31 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 Pfam Peroxidase 48 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1698 325 FunFam Peroxidase 35 177 - -
Lcy8g1698 325 Gene3D Peroxidase, domain 2 170 304 - -
Lcy8g1698 325 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Lcy8g1698 325 CDD secretory_peroxidase 31 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g2165 Lcy-Chr10:45611006 Lcy8g1698 Lcy-Chr8:43551438 2.57E-122 dispersed
Lcy11g0028 Lcy-Chr11:282475 Lcy8g1698 Lcy-Chr8:43551438 1.53E-154 dispersed
Lcy1g0670 Lcy-Chr1:5730655 Lcy8g1698 Lcy-Chr8:43551438 1.34E-100 dispersed
Lcy7g1485 Lcy-Chr7:25733852 Lcy8g1698 Lcy-Chr8:43551438 1.07E-123 dispersed
Lcy8g1698 Lcy-Chr8:43551438 Lcy8g1701 Lcy-Chr8:43574041 1.40E-163 dispersed
Lcy8g1698 Lcy-Chr8:43551438 Lcy8g1699 Lcy-Chr8:43560889 1.82E-149 tandem
Lcy4g0695 Lcy-Chr4:8358550 Lcy8g1698 Lcy-Chr8:43551438 9.09E-114 transposed
Lcy6g1012 Lcy-Chr6:10895091 Lcy8g1698 Lcy-Chr8:43551438 7.05E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1698 K00430 - csv:101207371 535.413