Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1699 ATGGCTGTGGCTTTAGCATTAGCCTTCTTGGCAATGTTCATGGGCAGCTCCTCAGCTCAGCTCTCCCCCAACTTCTACTACAAGAGCTGCCCCAAGCTCCTCAGCGTCGTTAGAGCCGGTGTTCGGTCCTCCGTTGCCAAGGAAGCTCGCATGGGCGCTTCCCTTCTCCGTCTCCACTTTCACGACTGCTTTGTTAATGGTTGCGATGGGTCGATTCTTCTTGAAGATACTCCTACGTTTACAGGAGAGCAAACCGCAGCTCCCAATAATAGATCTGTCAGAGGGTTCGATGTAATTGAGAGTATAAAGAAGAATGTTGAGAAAGTTTGTCCTGGTGTTGTCTCCTGCGCTGATATTTTGACTCTTTCTGCTCGTGACTCCGTCGTGGCGCTTGGAGGGCCAAGTTGGAAGGTGAAATTGGGAAGAAGAGATTCCAAAACAGCCAGCTTCTCCGCCGTGACCGGTGCCATTCCGCCGCCAACCTCCACCCTCGACACCCTCATCAACCGATTCAACACCAAAGGCCTCTCCCCTCGAGACTTGGAGACCAACATCGACGAGTCATTTGCCGAGGAGAGGCAAAGAAATTGTCCCAGAAACGGAGGTGACGACAATCGTGCCCCTCTGGACTTCAGAACCCCAAAGCTTTTCGACAACTACTACTACAAGAACCTGTTGGAGAAAAAGGCTCTGCTTCGCTCTGATCAGGTGCTACACGACGGTGGATCCACCGATTCCTTGGTCGAACTCTATGGCGACAACAGCGATGCCTTCGAGTCAGACTTTGTGACGGCCATGATCAAGATGGGGGACATTGAGCCACTTACTGGATCACAAGGCGAGATTCGAAAAGTAATTTTGGACCACTCTGATATGCAAGAAGCTGACGGGGACAGCGTGATACCAGCCCAAGGAGACAGCCAGGAAACGGAACCCGGAGGAAAGACAGGCCAAAGGGTCGAGCCACCTGCTCGGCCTCAGTCGAGCTCTTCCGCCTCCGTTCGGTCCCTGGTGCCCCCGGCTACCTCGGTGCCACTCAGTTCAGCTCGAATCGCCTCCGATTTCCTAAAAACCCTAGGAGTATGA 1086 53.13 MAVALALAFLAMFMGSSSAQLSPNFYYKSCPKLLSVVRAGVRSSVAKEARMGASLLRLHFHDCFVNGCDGSILLEDTPTFTGEQTAAPNNRSVRGFDVIESIKKNVEKVCPGVVSCADILTLSARDSVVALGGPSWKVKLGRRDSKTASFSAVTGAIPPPTSTLDTLINRFNTKGLSPRDLETNIDESFAEERQRNCPRNGGDDNRAPLDFRTPKLFDNYYYKNLLEKKALLRSDQVLHDGGSTDSLVELYGDNSDAFESDFVTAMIKMGDIEPLTGSQGEIRKVILDHSDMQEADGDSVIPAQGDSQETEPGGKTGQRVEPPARPQSSSSASVRSLVPPATSVPLSSARIASDFLKTLGV 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43560889 43564553 - Maker00000962 Lcy8g1699 640591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1699 361 MobiDBLite consensus disorder prediction 322 344 - -
Lcy8g1699 361 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Lcy8g1699 361 Pfam Peroxidase 37 181 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 Pfam Peroxidase 183 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 FunFam Peroxidase 24 166 - -
Lcy8g1699 361 CDD secretory_peroxidase 20 285 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy8g1699 361 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Plant peroxidase signature 264 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 MobiDBLite consensus disorder prediction 296 344 - -
Lcy8g1699 361 SUPERFAMILY Heme-dependent peroxidases 20 285 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 Gene3D Peroxidase, domain 2 158 181 - -
Lcy8g1699 361 ProSiteProfiles Plant heme peroxidase family profile. 20 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 PANTHER PEROXIDASE 72-RELATED 9 181 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1699 361 Gene3D - 270 285 - -
Lcy8g1699 361 Gene3D Peroxidase, domain 2 183 269 - -
Lcy8g1699 361 Gene3D - 24 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g1699 Lcy-Chr8:43560889 Lcy8g1701 Lcy-Chr8:43574041 2.66E-168 dispersed
Lcy8g1698 Lcy-Chr8:43551438 Lcy8g1699 Lcy-Chr8:43560889 1.82E-149 tandem
Lcy8g1699 Lcy-Chr8:43560889 Lcy8g1700 Lcy-Chr8:43569788 2.40E-160 tandem
Lcy6g0994 Lcy-Chr6:10580855 Lcy8g1699 Lcy-Chr8:43560889 2.65E-09 wgd
Lcy7g1047 Lcy-Chr7:11145258 Lcy8g1699 Lcy-Chr8:43560889 3.04E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1699 K00430 - csv:101204245 508.834