Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1700 ATGGCGATTACAGCTTCTTATTCCAACAAAATGGCCGTGGCTTTAGCATTAGCCTTCTTGGCAATGTTCATGGGCAGCTCCTCAGCTCACCTCTCCCCCAACTTCTACTACAAGAGCTGCCCCCAGCTCCTCCGCATCGTTAGAGCCGGTGTTCGGTCCGCCGTCGCCAAGGAACCTCGCATGGGCGCTTCCCTTCTCCGTCTCCACTTTCACGATTGCTTCGTTAACGGTTGCGATGGTTCGATTCTTCTAGAAGATACTCCTACGTTTAGAGGAGAACAAACAGCAGCTCCCAACAATAGATCCGTCAGAGGGTTCAACGTGATTGAGAGTATAAAGAGAAATATAGAAAAAGTTTGTCCTGGCATTGTTTCTTGTGCTGATATTCTGACTCTTTCTGCTCGTGACTCCGTCGTAGCATTGGGAGGACCAAGCTGGAGGGTGAAATTAGGAAGAAGAGATTCAAAAACAGCCAGCTTCTCCGCCGTGAGCGGTGCCATTCCGCCGCCAACCTCCACCCTCAACACTCTCATCGATCGGTTCAACACCAAAGGCCTCTCCCCTCGAGACTTGGTTGCTTTATCAGGGGCGCACACGATCGGACAAGCAAGGTGTTTGTTTTTCAAGAACCGAATATACAACGAGACCAACATCGACAAGTGGTTTGCTAAGGAGAGACAGAGAAGCTGCCCGAGAAATGGAGGAGACGACAATCGTGCTCCTCTGGACTTCAGAACTCCGAAGCTTTTTGACAATTACTACTACAAGAACCTTGTGGAGAAAAAGGCCTTGCTCCGCTCCGACCAGGTGCTACACGACGGTGGATCCACTGATTCTTTGGTCGAACTCTACGGTCGGGGTTAA 864 50.35 MAITASYSNKMAVALALAFLAMFMGSSSAHLSPNFYYKSCPQLLRIVRAGVRSAVAKEPRMGASLLRLHFHDCFVNGCDGSILLEDTPTFRGEQTAAPNNRSVRGFNVIESIKRNIEKVCPGIVSCADILTLSARDSVVALGGPSWRVKLGRRDSKTASFSAVSGAIPPPTSTLNTLIDRFNTKGLSPRDLVALSGAHTIGQARCLFFKNRIYNETNIDKWFAKERQRSCPRNGGDDNRAPLDFRTPKLFDNYYYKNLVEKKALLRSDQVLHDGGSTDSLVELYGRG 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43569788 43570842 - Maker00000625 Lcy8g1700 640592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1700 287 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Lcy8g1700 287 Pfam Peroxidase 47 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 SUPERFAMILY Heme-dependent peroxidases 31 285 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 CDD secretory_peroxidase 30 284 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy8g1700 287 PANTHER PEROXIDASE 72-RELATED 18 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 FunFam Peroxidase 168 287 - -
Lcy8g1700 287 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Lcy8g1700 287 ProSiteProfiles Plant heme peroxidase family profile. 30 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g1700 287 Gene3D Peroxidase, domain 2 168 284 - -
Lcy8g1700 287 Gene3D - 34 167 - -
Lcy8g1700 287 FunFam Peroxidase 34 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g1700 Lcy-Chr8:43569788 Lcy8g1703 Lcy-Chr8:43592359 6.07E-94 dispersed
Lcy8g1699 Lcy-Chr8:43560889 Lcy8g1700 Lcy-Chr8:43569788 2.40E-160 tandem
Lcy8g1700 Lcy-Chr8:43569788 Lcy8g1701 Lcy-Chr8:43574041 1.42E-167 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1700 K00430 - csv:101204245 491.886