Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1729 ATGGCCGCCGCCGCCTGCTCCACCGACTTCGTCCGCGACTCCGGCTGCCGCGACGGCCGCGCCGCCGCCCACCTCAAGCTGATTTCCATCTTCCTCATCTTCTTCACCAGCGTCATCGGCGTCTCCTTGCCGGTCGTCCTGACCCGCTTCTTCCACGGCAAACCGCTTTACGACAAAGCGATTCTAGTCATCAAGTGCTTCGCCGCCGGCGTCATCCTCTCCACCTCGCTCGTCCACGTCCTCCCCGACGCCTTCGACGCCCTCGCCGACTGCCACGTGGCGTCCCAACACCCCTGGCGGGACTTCCCCTTCTCCGGTCTGGTCACCATGATCGGCGCCCTGCTGGCGCTTCTCGTCGACGTCACCGCCACATCACACGTGGAGCACGGGCACTACAATCCGGTGGAGACTCAGGAGAAACCGGGGACCGAGTCTGCCGGTGATATTGGGCTGCTGGTGTCGAAATCGGAGATGGGGGATTTGGGAGGAGGGAGTGGTAGCTGCGACCGGCGACCGGAAGAGGAATTGGTGAAGTTGAAGCAGAAACTGGTGTCTCAGGTTTTGGAAATTGGGATTATTTTTCACTCCGTGATTATTGGAGTTACGATGGGAATGTCACAAAATCAGTGCACTATCAAGCCTCTTGTTGCAGCTCTTGCATTTCACCAAATCTTCGAAGGAATGGGCCTCGGCGGCTGCATTGCTCAGGCAGGATTCAGCTTCACAACGACGTCGTATATGTGCTTCATGTTCTCGGTGACGACGCCGATGGGGATAGTGTTGGGAATGGTACTGTTTTCAATTACAGGTTACGACGACAGCAGTCCCAAAGCTCTGATCATGGAGGGTTTATTGGGTTCGTTTTCATCTGGGATTCTCATATACATGGCTCTTGTTGATCTAATAGCCGTTGATTTTTTCCACAACAAGATGATGAGCTCGAATCAACGGCTGAAGAAGGCTTCTTTTATTGCCTTGTTGCTTGGGTCTGCTTCCATGTCGGTTTTGGCTTTGTGGGCATGA 1023 55.23 MAAAACSTDFVRDSGCRDGRAAAHLKLISIFLIFFTSVIGVSLPVVLTRFFHGKPLYDKAILVIKCFAAGVILSTSLVHVLPDAFDALADCHVASQHPWRDFPFSGLVTMIGALLALLVDVTATSHVEHGHYNPVETQEKPGTESAGDIGLLVSKSEMGDLGGGSGSCDRRPEEELVKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIKPLVAALAFHQIFEGMGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGMVLFSITGYDDSSPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQRLKKASFIALLLGSASMSVLALWA 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43794340 43796053 + Maker00000722 Lcy8g1729 640621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1729 340 PANTHER ZINC/IRON TRANSPORTER 22 339 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Lcy8g1729 340 Pfam ZIP Zinc transporter 24 337 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Lcy8g1729 340 NCBIfam ZIP zinc/iron transport family 13 340 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g1729 Lcy-Chr8:43794340 Lcy9g1445 Lcy-Chr9:39486126 2.50E-74 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1729 K14709 - csv:101214729 540.421