Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1832 ATGAACAAAGGTTTTTGGATGACCAAGGGTCCTGGGAATGAAAATGATGCAAATTCAACTTTTGATAGCCCATCATTGTTAGACACAAAGCGGGCACATCACTGGTTTATAGATGGTTGTGAGGCACAGGTTTTCCCCAACAAGAAGCAAGCAATTCAAGCTCCAAATAGCAAAATGACTGGAACGCTGTCAAATATGAATGTTCTTCATTGGGAGCAGCATTCTGCTAATTATCAGTCTGTTTCACATCAACTTATTGGTCGCATATTTGGACCTGAATCAGTAAGATCTGCTGACTTTGATCTAACAAAAGAATCTTCTGTAATTTCTGATAATTTGGATCTCGGGAGAAAAGGTATGGAAGATCCATATGGAGAAGATGCATCTGTGGGGTTGTCTATATCTCATGGTATGGAGGATCCTGAAGCATCTCTTAGCTATGGAGGAATTAGAAAAGTGAAAATCAACCAGGTTAAAGATAATATACATAGTCTGCAACCATGTCTAAGAAGCAATTCTAATAGGGAAGATAGTGGTCAACTATCCATAGAAGGTTACTATAAGGAAATTGAAGCGGGTCTTGTATCTGTGGGATCAGCCTATATTAAGGAGGACGACAGTTTCAATTTGATGAATCAAACGTCCACAGATGGGGATCACCATATTGGGTTACTGGGTCATAGTGAGAAGATGGATGGCAATGTTGTCTCCATTGATGATGATTACAGTAAGCGGGATCCAAATATAATCTCATTTGGTGGATTTCCTGATGACCAAGATATTATCTCTTTAGGCAGGACTCTTGGAAGCCATGACCCAGCATTCTACGAATCTTCATTCCAACCATCTGAAGCTGTTGGTGTCACAGAGTTGGAATCATCAAATTTTGATGTAGCTATAAGCAGTACTCAGATAGCTAAGCAAAAGCCTGACATGTCACTGAAGAGTAGACCGGAATACAAAATGAGGAAAGAAGCTCCAAACAGCTTTCCTTCAAATGTTAGAAGTTTGATCTCAACCGGTATGCTCGATGGTGTGCCTGTGAAGTATGTTTCTGTAGCTAGAGAGGAGCTTCGTGGAATTATAAGGGGATCTGGCTATCTTTGTGGATGCCAATCTTGCAACTTTTCCAAGATGCTTAATGCCTATGAGTTTGAGCGGCATGCTGGCTGCAAAACAAAACACCCAAACAATCATATATACTTTGAGAATGGAAAGACTATTTATCAGATAGTACAAGAATTGAGAAGCACTCCGGAGAGCTTGTTGTTTGATACAATTCAAACTATCTTTGGTGCTCCTATCAATCAGAAATCTTTTCGGATTTGGAAAGAATCATTTCAAGCAGCTACCCGTGAGCTTCAGCGCATATATGGCAAGGATGAGCTTAACCTTTAG 1398 40.13 MNKGFWMTKGPGNENDANSTFDSPSLLDTKRAHHWFIDGCEAQVFPNKKQAIQAPNSKMTGTLSNMNVLHWEQHSANYQSVSHQLIGRIFGPESVRSADFDLTKESSVISDNLDLGRKGMEDPYGEDASVGLSISHGMEDPEASLSYGGIRKVKINQVKDNIHSLQPCLRSNSNREDSGQLSIEGYYKEIEAGLVSVGSAYIKEDDSFNLMNQTSTDGDHHIGLLGHSEKMDGNVVSIDDDYSKRDPNIISFGGFPDDQDIISLGRTLGSHDPAFYESSFQPSEAVGVTELESSNFDVAISSTQIAKQKPDMSLKSRPEYKMRKEAPNSFPSNVRSLISTGMLDGVPVKYVSVAREELRGIIRGSGYLCGCQSCNFSKMLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTIFGAPINQKSFRIWKESFQAATRELQRIYGKDELNL 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44640467 44643957 - Maker00000644 Lcy8g1832 640724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1832 465 PANTHER AUTOIMMUNE REGULATOR 1 449 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Lcy8g1832 465 MobiDBLite consensus disorder prediction 1 23 - -
Lcy8g1832 465 Pfam Tify domain binding domain 360 415 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g0866 Lcy-Chr7:8614634 Lcy8g1832 Lcy-Chr8:44640467 5.83E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1832 - - - 0.0