Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1847 ATGCTTAAGTCAGCAAGCAGAACGATGGGAAGCAAGGAAGCGGAACCGGAGCGGCTAGAGGCAGCGGGGGAAAACGAACTCGGCCCGCCCAAGGCCGAGGCCGATCATATGGGTCGGGCGAAATTGGCCCGGCCCGTTGGTCTGGTCTTCCTCTGGGTCGTTTCCTGGTCCTATCTCCGTCCGATTGTCCTCGTCACGATGGATTGTGGAAGAAGATTTGGATTACTCTTCTGGGGTTTGTTTATTTCGTTGCTGCCTTGCATTTCTTGTTTGTTTAATCCGGTGGATAATTATCTTATTGACTGTGGATCGCCTGTAAATGTCTCGGTGGGTAGTCGTGTTTTCATGGCTGATAGTTTGGCCTCAAACTTGCTTTCCAACACACAAGCCATTCTGGCTAATACGTCTTCAGTACCTGCCTCTTCTTCTAATGATTCGTCGCTGTTTGAAACGGCTAGAGTTTTTACTGGAACATCAAGATTCAGGTTTCCAATCAAACAGGCTGGAAGGCACTGGATTCGTCTCTATTTCTATCCATTTGCGTTTTCTGGCTTCAATATGAGTGCTGCAAATTTTAGTGTTTCCACCCAAAACTTTGTTCTGCTGAGAGATTTGGTTGTAGAGAAGAATCCTGTGGTCAAAGAATTCTCTGTGAACGTAACAGATACTCTTGAAGTTATCTTTGCTCCTGTTAATGGCTCCATTGCATATGTGAATGCCATTGAAGTTGTTTCTGTTCCTGACATTCTCATCGCTGATGAAGCCAATGCGTTAGAACCAGCTGGTAAATTTCAAGGGCTGACTACTCTGGCATATGAGACAGTTGCTAGGGTTAATATGGGTGGGCCAAAAGTTGCTCCCGATGGTGATCCTCTTTCACGAAATTGGGTTTCTGATGAAAGCTTTCTAGTTAATAAGAATTTTGCAACAAGTTTCTCTAACATTCCAGCTGTTAAATACAGTCCTGAAGGGGCAGCACCGGAGATTGCTCCAAAGGCTGTCTATGGTACCCTCACCGAGATGAACTCGAAGGATGATCCGAACAGCAATTTCAATGTGACATGGCAGTTTAAAGTGGATCCTGGGTTTCAGTACCTTGTTCGGTTTCACTTCTGTGACATTGTGAGTAAATCTCTACACCAACTTTATTTCAATGTTTACATTGACTCGTGGCTGGTTTCTCGGGATCTAGATCTTAGTGTTCCTCTCAGTAATACCCTGGGCGCTCCCTACTATCAGGACTCTGTTACAGGATTGATCAAGAATGACAAACTTCTTGTGAGTATTGGCCCAGCAAACTTAGCCAGTGTGTATCCAAATGCCATTCTAAATGGTCTGGAAGTCATGAAAATGAACAACTCTGTTGGCAGCCTTAGTGGGGAAGACTCTGTAATTAGTTTTCCAGGCTCAACTTCTTCAAGTAAGCACGTTGGCGTCATTGTGGGTGTGAGCGTTGGTGCATTTGTTGCAGCAATATTGGTTGGCATTCTTTTTATGTTGCACAGACGAAAAAGAAAGGGAATGCATCAAGCTCCATCAAAAACGTGGATTTCAATATCCACTGCTGGAGGAATGTCACACACTATGGGAAGTAAATACTCAAATGGCACAATCACGAGTGCTGCTTCCAACTATGGGTATCGTATACCTTTTGCAACAATTCAAGAGGCTACAAATAACTTTGATGAGAGCCGGGTCATTGGTATTGGTGGGTTCGGGAAAGTATACAAAGGAGTTTTAAATGATGGCACCAAAGTTGCTGTGAAGAGGGGTAATCCGCGTTCCCAACAAGGACAGGCAGAGTTTCAAACTGAAATTGAGATGCTATCACAGTTCCGTCATCGCCATCTGGTTTCATTGATTGGGCACTGTGATGAAAGGAATGAGATGATACTGGTTTATGAGTATATGGAACAGGGGACCCTGAAGAGTCATCTATACGGTTCTGATTTCCCTAGTTTGAGCTGGAAGGAGAGACTGGAGGTTTGCATTGGAGCCGCTAGAGGACTTCATTACCTCCACACTGGTTATGCTAAACCAGTTATTCATCGTGATGTGAAGTCTGCCAACATTTTACTCGATGAAAATCTCATGGCGAAGGTTGCTGACTTTGGTCTTTCAAAGACAGGGCCTGAAATTGATCAAACCCATGTCAGTACAGCTGTGAAAGGAAGTTTTGGGTACCTCGATCCTGAATATTTCAGGAGGCAACAACTGACTGAGAAATCAGATGTTTATTCTTTTGGAGTTGTTTTGTTTGAAGTCCTTTGTGCAAGACCTGTCATAGATCCAACCCTTCCGAGAGACAGGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAGAGGGCAGTTGGACCAAATCATTGATTCTACTCTAGTAGGGAAAATTAGACCAACTTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTACGGAGTTGACAGGCCATCTATGGGAGACGTGTTATGGAATTTGGAGTACGCTCTTCAGCTACAAGAAGCCGTTATTGAAGTTGATCCGGAAGATAACAGTACAAATATGATCGGCGAGCTCTCTCCACAAATTAACAATTTCAATGATATTGAGACAAGTGCTTCTGCGACACGGTTCGACATTCCAGGTGTGGATGATCTTTCTGGAGTCTCCATGAGCAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGGTAGATGA 2709 44.3 MLKSASRTMGSKEAEPERLEAAGENELGPPKAEADHMGRAKLARPVGLVFLWVVSWSYLRPIVLVTMDCGRRFGLLFWGLFISLLPCISCLFNPVDNYLIDCGSPVNVSVGSRVFMADSLASNLLSNTQAILANTSSVPASSSNDSSLFETARVFTGTSRFRFPIKQAGRHWIRLYFYPFAFSGFNMSAANFSVSTQNFVLLRDLVVEKNPVVKEFSVNVTDTLEVIFAPVNGSIAYVNAIEVVSVPDILIADEANALEPAGKFQGLTTLAYETVARVNMGGPKVAPDGDPLSRNWVSDESFLVNKNFATSFSNIPAVKYSPEGAAPEIAPKAVYGTLTEMNSKDDPNSNFNVTWQFKVDPGFQYLVRFHFCDIVSKSLHQLYFNVYIDSWLVSRDLDLSVPLSNTLGAPYYQDSVTGLIKNDKLLVSIGPANLASVYPNAILNGLEVMKMNNSVGSLSGEDSVISFPGSTSSSKHVGVIVGVSVGAFVAAILVGILFMLHRRKRKGMHQAPSKTWISISTAGGMSHTMGSKYSNGTITSAASNYGYRIPFATIQEATNNFDESRVIGIGGFGKVYKGVLNDGTKVAVKRGNPRSQQGQAEFQTEIEMLSQFRHRHLVSLIGHCDERNEMILVYEYMEQGTLKSHLYGSDFPSLSWKERLEVCIGAARGLHYLHTGYAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPRDRVNLAEWAMKWQKRGQLDQIIDSTLVGKIRPTSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIEVDPEDNSTNMIGELSPQINNFNDIETSASATRFDIPGVDDLSGVSMSRVFSQLVKSEGR 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44807867 44811777 + Maker00001015 Lcy8g1847 640739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1847 902 Pfam Protein tyrosine and serine/threonine kinase 564 757 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1847 902 ProSiteProfiles Protein kinase domain profile. 561 834 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1847 902 CDD STKc_IRAK 567 832 - -
Lcy8g1847 902 PANTHER OS07G0166700 PROTEIN 548 839 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Lcy8g1847 902 FunFam receptor-like protein kinase FERONIA 525 636 - -
Lcy8g1847 902 SMART serkin_6 561 834 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1847 902 ProSitePatterns Protein kinases ATP-binding region signature. 567 589 IPR017441 GO:0005524(InterPro)
Lcy8g1847 902 MobiDBLite consensus disorder prediction 10 33 - -
Lcy8g1847 902 Gene3D Transferase(Phosphotransferase) domain 1 637 854 - -
Lcy8g1847 902 FunFam Putative receptor-like protein kinase 97 247 - -
Lcy8g1847 902 Gene3D - 270 453 - -
Lcy8g1847 902 Gene3D - 97 246 - -
Lcy8g1847 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 681 693 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1847 902 SUPERFAMILY Protein kinase-like (PK-like) 538 832 IPR011009 -
Lcy8g1847 902 FunFam Receptor-like protein kinase FERONIA 271 453 - -
Lcy8g1847 902 MobiDBLite consensus disorder prediction 1 33 - -
Lcy8g1847 902 Pfam Malectin-like domain 100 450 IPR024788 -
Lcy8g1847 902 Gene3D Phosphorylase Kinase; domain 1 524 636 - -
Lcy8g1847 902 FunFam Receptor-like protein kinase FERONIA 637 852 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g0739 Lcy-Chr13:11216729 Lcy8g1847 Lcy-Chr8:44807867 3.08E-69 dispersed
Lcy6g0138 Lcy-Chr6:1214636 Lcy8g1847 Lcy-Chr8:44807867 5.92E-242 dispersed
Lcy8g1847 Lcy-Chr8:44807867 Lcy9g1020 Lcy-Chr9:33629571 2.38E-71 dispersed
Lcy1g0115 Lcy-Chr1:988996 Lcy8g1847 Lcy-Chr8:44807867 2.09E-196 transposed
Lcy7g0791 Lcy-Chr7:7669895 Lcy8g1847 Lcy-Chr8:44807867 1.44E-264 transposed
Lcy9g1271 Lcy-Chr9:37310086 Lcy8g1847 Lcy-Chr8:44807867 1.82E-281 transposed
Lcy7g0857 Lcy-Chr7:8515002 Lcy8g1847 Lcy-Chr8:44807867 9.97E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66144 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1847 - - - 0.0