Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1859 ATGACTATTTCAAGGCTCACACAACTTCTTTGTTCGACACCCGAGGATTCTACCCAACACAGCTACCTCTGGGGCATGGCTCTGATACTACTTGTAAGGGACTACCCTAGCCAATGTGGGACTTTGGTCGCACACCCAACAATCCTCCCCTCGAACAAAGTACCACCGAGCCTCCCCTCAACTAGTCATCTATCCGTCCAACTCTCTAGGCTCCACCGCTTTACCGAGAGTTCTTGCTCTTATCTAGGACGACTCCTCTTCTCCGGAGTATACCCGCCTACCCAGAACTCAACCACGGACCTCCCCATGACTATTTCAAGGCTCACACAACTTCTTTGTTCGACACCCGAGGATTCTACCCAACACGGCTACCTCTGGGACATGGCTCTGATACCACTTTTCCACTTTCAAGCAGCGCTTTCTCCAAGAGACCCAATGGAACCGTTGGATAAACCACTGCCGAAGTCCTCGCCTCTCGCGCCATTTCCTCGGGACTCTCGAGGATCGCTCGAGGTTTTCAATCCCTCGGCCACTTACTCGTCCCGATCGATCAACTCCATTTCTCGGGCGAACCCGGCGTGGCCGAATTGGGTGGAGCCACGTAGCAGCGGGGAGTCGGAGTCGCCAAGAGTCGGCGCCAAACCGACGAGTAAATCCGGCGAGGAGATTACGTCATGGATGGCCTTCAAGGACTCGAACCCTTCACCACAACCGACCTCGCCGCTCGCTCAGAAGACAATTTCGGCTATTCTCAGCGACAAATCGCCGCCGAAATCAGCGGACGAAGTCGGCTCCGCCGCTTTACGCGCCGCCGAGTGGGGATTGGTGTTGAAAACCGATACGGAGACTGGGAAGCCGCAGGGCGTCGGAGTTCGAACTTCCGGCGGCGATGAACCGAATTCCAAACAGGAGCATTCGAGAAGAACTTCGAATAACTCGGTGCGGAGTTCGGGCGACATGTCGGACGATGGGGCAAGAGAAAGGGGGATTCCGAGAGTCTCTGAGGATTTGAAAGACGCTCTGTCGACATTTCAACAAACATTTGTGGTTTCTGATGCTACGAAACCTGATTATCCGATTATGTACGCCAGTGCTGGATTCTTCAAAATGACTGGCTATACTTCCAAGGAGGTTATCGGAAGAAATTGTCGATTTTTACAGGGTGCAGATACAGACCCAGAAGATGTGGCTAAGATCCGAGAAGCTTTACAAGCGGGGACGAGTTACTGTGGGAGGTTGTTGAATTACAAGAAAGATGGGACCCCTTTTTGGAATTTACTTACTATTTCACCAATCAAAGATGATGATGGCAAAGTTCTCAAATTTATTGGGATGCAAGTGGAGGTGAGCAAACACACAGAGGGCTTCAAAGATAAGATGGTCCGTCCCAATGGGTTGCCAGAATCCTTGATTCGTTATGATGCCCGTCAAAAGGATATGGCTACCAGTTCGGTGACGGAGATCGTGCAAGCGGTGAAGAGGCCTCGGTCTGTAAGTGAATATAGACCTCGGGCTCTAAGTGAATCTATGAACCGCCGATTAGTTAGAAAATCCGGCGGCGGCGGCGGCGGCGGCGGCGATGAGGAGGTTAGATTTGAAGCGACTATGGTTAGGCGAAAGTCAGAGAGTGCAGCAGTTTCAACTGGACGAAAATCACATGGAGGAAGTAGAAGGTCGATGCAGCGTATCAGTGAGCTGCCGGAGAAGAAACCCAAAAGGTTTAGCCGTCGTTCATTTATGGGGATTATGAGGAAAAGTCAATCATATGTTGAAACCTTTGATATTGAAGATGGTTCCGATGATGATAATGAGACCGATGAGGACGAGAGACCAGATAGCGTTGATGACAAAGTAAGGCAGAGGGAAATGAGGAAAGGTATTGATTTAGCTACTACCCTCGAACGTATAGAGAAAAACTTCGTCATTACCGATCCTAGATTGCCCGACAATCCCATTATATTTGCTTCTGATAGCTTCCTGGAGCTAACCGAGTACAGTAGAGAAGAAATCTTGGGAAGAAATTGCAGGCATTCGAATGAGCCTAACAATATCTGTCATTATTCTGGATGTTATAGGTTTTTGCAAGGTCCTGAAACTGATCGAGCAACCGTCAAGAAAATAAGAGATGCAATCGACAACCAAACAGAAGTTACAGTGCAGCTTATAAACTACACGAAAAGCGGTAAGAAGTTTTGGAACCTGTTTCATCTACAACCTATGCGTGACCAGAAGGGAGAAGTTCAGTATTTTATTGGAGTACAACTTGATGGTAGTCAGCACGTGGAACCGCTAAGCAATTGCATACCGGAAAATACTGCAAAAGAGGGTGAAAAATTGATAAAAGAAACTGCAGAAAACGTTGATTTGGCGGCTAGAGAACTTCCTGATGCCAATTTGACACCAGAAGATTTATGGGCAAATCATTCTAAGGTGGTTCAACCGAAACCCCACAGAAAGGATAGTCCTTCTTGGAAAGCTATCCAGAAGATTATAGACAGCGGAGAACAGATAGGACTGAAACATTTCAAGCCAATTAAACCATTGGGATCGGGCGATACTGGCAGTGTGCATTTGGTAGAACTGTGTGGGACTGATCAGTATTTTGCAATGAAGGCTATGGATAAGGGTGTTATGCTTAACCGCAACAAGGTACATAGAGCTTGCGCCGAGAGGGAAATACTTGACATGTTGGATCATCCTTTTCTTCCTGCATTATATGCTTCATTTCAGACAAAAACACATGTTTGTCTTATAACTGATTACTGTCCTGGTGGAGAACTCTTTCTGCTTTTGGACAGACAACCTACAAAGGTCTTAAAGGAAGATGCTGTAAGGTTTTATGCTGCTGAAGTTGTCGTCGCATTGGAGTATCTTCATTGTCAAGGGATAATTTACCGGGATTTGAAGCCTGAGAATGTTCTACTCCAGGGCAATGGACACGTGGCCTTGACGGATTTTGACTTGTCATGTTTGACTTCTTGCAAACCTCAGCTTTTGCTTCCAACGGCAAATGAGAAGAAAAAGCAAACAAGAGCTCAACAGGCTCCAATATTTATGGCTGAACCTATGCGAGCATCGAACTCATTCGTTGGAACTGAAGAGTACATAGCACCGGAAATCATTACCGGGGCTGGCCATACTAGTGCAGTGGACTGGTGGGCTTTGGGTATCCTTCTATATGAGATGCTCTATGGATACACACCCTTTAGGGGGAAGACAAGACAAAAAACTTTTGCCAACATTCTTCATAAGGATCTTAAATTTCCGAGAAGTATATCGGCTAGTCTCAATGCAAAGCAGTTAATCTTTAGGTTATTGCATAGGGATCCCAAAAACCGGTTGGGTTCTCGAGAAGGAGCTAGTGAAATCAAACGACATCCTTTCTTCCGAGGTGTCAATTGGGCACTCGTTCGTTGCATGAATCCTCCCGAGCTCGAAGCGCCTCTTTTCCAGACCACCGATGCCGAAAAAGAAGCAAACAAGGCATCAGATTTTGATCTAAAAGATCTTGAACTCAGTGTTTTCTGA 3528 46.97 MTISRLTQLLCSTPEDSTQHSYLWGMALILLVRDYPSQCGTLVAHPTILPSNKVPPSLPSTSHLSVQLSRLHRFTESSCSYLGRLLFSGVYPPTQNSTTDLPMTISRLTQLLCSTPEDSTQHGYLWDMALIPLFHFQAALSPRDPMEPLDKPLPKSSPLAPFPRDSRGSLEVFNPSATYSSRSINSISRANPAWPNWVEPRSSGESESPRVGAKPTSKSGEEITSWMAFKDSNPSPQPTSPLAQKTISAILSDKSPPKSADEVGSAALRAAEWGLVLKTDTETGKPQGVGVRTSGGDEPNSKQEHSRRTSNNSVRSSGDMSDDGARERGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGFKDKMVRPNGLPESLIRYDARQKDMATSSVTEIVQAVKRPRSVSEYRPRALSESMNRRLVRKSGGGGGGGGDEEVRFEATMVRRKSESAAVSTGRKSHGGSRRSMQRISELPEKKPKRFSRRSFMGIMRKSQSYVETFDIEDGSDDDNETDEDERPDSVDDKVRQREMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRHSNEPNNICHYSGCYRFLQGPETDRATVKKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLSNCIPENTAKEGEKLIKETAENVDLAARELPDANLTPEDLWANHSKVVQPKPHRKDSPSWKAIQKIIDSGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTDQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVALTDFDLSCLTSCKPQLLLPTANEKKKQTRAQQAPIFMAEPMRASNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPRSISASLNAKQLIFRLLHRDPKNRLGSREGASEIKRHPFFRGVNWALVRCMNPPELEAPLFQTTDAEKEANKASDFDLKDLELSVF 1175
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 44891114 44905118 - Maker00001446 Lcy8g1859 640751
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1859 1175 MobiDBLite consensus disorder prediction 590 621 - -
Lcy8g1859 1175 Gene3D Transferase(Phosphotransferase) domain 1 926 1140 - -
Lcy8g1859 1175 PANTHER FLIPPASE KINASE 1-RELATED 797 1153 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lcy8g1859 1175 NCBIfam PAS domain S-box protein 360 452 IPR000014 -
Lcy8g1859 1175 SUPERFAMILY PYP-like sensor domain (PAS domain) 641 756 IPR035965 -
Lcy8g1859 1175 Pfam Protein kinase domain 845 1129 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1859 1175 SMART pas_2 627 696 IPR000014 -
Lcy8g1859 1175 SMART pas_2 335 404 IPR000014 -
Lcy8g1859 1175 SMART serkin_6 842 1129 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1859 1175 ProSiteProfiles PAC domain profile. 407 461 IPR000700 -
Lcy8g1859 1175 Gene3D PAS domain 347 502 - -
Lcy8g1859 1175 FunFam LOV domain-containing protein 841 925 - -
Lcy8g1859 1175 ProSiteProfiles PAS repeat profile. 629 714 IPR000014 -
Lcy8g1859 1175 Gene3D PAS domain 613 794 - -
Lcy8g1859 1175 CDD STKc_phototropin_like 840 1148 - -
Lcy8g1859 1175 ProSiteProfiles Protein kinase domain profile. 842 1129 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy8g1859 1175 SUPERFAMILY PYP-like sensor domain (PAS domain) 354 446 IPR035965 -
Lcy8g1859 1175 CDD PAS 640 756 IPR000014 -
Lcy8g1859 1175 ProSiteProfiles PAS repeat profile. 333 404 IPR000014 -
Lcy8g1859 1175 MobiDBLite consensus disorder prediction 536 578 - -
Lcy8g1859 1175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 963 975 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy8g1859 1175 Gene3D Phosphorylase Kinase; domain 1 841 925 - -
Lcy8g1859 1175 SMART pac_2 718 760 IPR001610 -
Lcy8g1859 1175 SMART pac_2 410 452 IPR001610 -
Lcy8g1859 1175 FunFam Putative LOV domain-containing protein 347 503 - -
Lcy8g1859 1175 MobiDBLite consensus disorder prediction 191 220 - -
Lcy8g1859 1175 Pfam PAS domain 648 756 IPR000014 -
Lcy8g1859 1175 Pfam PAS domain 354 450 IPR000014 -
Lcy8g1859 1175 FunFam LOV domain-containing protein 614 794 - -
Lcy8g1859 1175 FunFam Putative LOV domain-containing protein 926 1141 - -
Lcy8g1859 1175 MobiDBLite consensus disorder prediction 278 327 - -
Lcy8g1859 1175 SUPERFAMILY Protein kinase-like (PK-like) 820 1151 IPR011009 -
Lcy8g1859 1175 MobiDBLite consensus disorder prediction 145 173 - -
Lcy8g1859 1175 CDD PAS 360 449 IPR000014 -
Lcy8g1859 1175 ProSitePatterns Protein kinases ATP-binding region signature. 848 871 IPR017441 GO:0005524(InterPro)
Lcy8g1859 1175 ProSiteProfiles PAC domain profile. 715 769 IPR000700 -
Lcy8g1859 1175 MobiDBLite consensus disorder prediction 594 611 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy5g0028 Lcy-Chr5:472393 Lcy8g1859 Lcy-Chr8:44891114 3.22E-54 dispersed
Lcy7g0251 Lcy-Chr7:2170576 Lcy8g1859 Lcy-Chr8:44891114 1.73E-51 dispersed
Lcy7g0605 Lcy-Chr7:5456184 Lcy8g1859 Lcy-Chr8:44891114 3.00E-47 dispersed
Lcy8g1325 Lcy-Chr8:39988621 Lcy8g1859 Lcy-Chr8:44891114 2.21E-253 dispersed
Lcy8g1859 Lcy-Chr8:44891114 Lcy8g1981 Lcy-Chr8:46074575 3.44E-105 dispersed
Lcy8g1859 Lcy-Chr8:44891114 Lcy4g0413 Lcy-Chr4:5030181 3.26E-276 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66145 None None None None Lcy PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1859 K20715 - csv:101214662 1809.27