Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g1891 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGCCGACGTGGGCCGTCGCCGTCGTCTGTTTTGTCTTGGTTTTGATTTCTATTATCATCGAACACATTCTTCATCTCATCGGAAAGTGGCTGAAGAAGAAGCACAAACGAGCTCTTTACGAAGCGCTCGAGAAAATCAAATCAGAGCTGATGCTGCTGGGGTTCATTTCGCTGCTGCTGACGGTGGGACAGAGCTTAATCACCAATATTTGTATACCTCCAGAAGTGGCTGCCACGTGGCATCCATGCAGCCCTCAGAAAGAGCTGGAACTGACTAAACAAGATGACCTGGTCGACTCCGACAACAATCGCCGGAAACTCCTCGCCGTCTCCCCTGCCAATGCCACTTTCCGCCGTGTCCTCGCCGCCGCCGGTGGAACCGACAAATGTGCTGAGAAGGGTAAAGTTCCATTTGTGTCGGAAGGAGGAATTCATCAACTACATATATTCATTTTCGTGTTGGCTGTTTTCCATGTTCTTTACTGTGTCTTGACTTTAGCTTTGGGCAATGCGAAGGTATATGAGAAGTTGGAAGTCGTGGGAAAAGGAAACCAGAACCGTGGAGTACCAATTCTCACACGATCCGGAACGATTTCGATTTGCAAGAGATACGTCGTTTGGGAGAAGGCATTTGAGCTTTTGGACGAAATCGCCCTTCTTAATTTGGATTGTAAGATAATTTCGTCTCATTTACTCTTCCTTTTTTTCTTTTACCATTTGGACCCTCCCATCTGGTTCTTCGCTGTCCTCTTCCTACTTTTCAACACACACGGGTGGAGGGCTTATCTATGGCTGCCGTTTGTCCCATTAATCATTGTATTATTGGTGGGGACGAAATTGCAAGTGATAATTACGAAAATGGCCCTGAGGATTCAAGAAAGAGGAGAGGTGGTGAAGGGAGTGCCAGTGGTAGAGCCAGGGGATGACCTTTTCTGGTTCAATCGACCTCGTCTCATTCTTTACCTCATCAACTTTGTGCTCTTTCAAAATGCCTTTCAGCTTGCTTTCTTTGCTTGGACTTGGAAAGAATTTGGGATGAAATCTTGTTTCCACGAGCACACAGAGGATCTGGTGATAAGAATAACAATGGGAGTCCTCGTTCAAATCCTCTGCAGTTACGTTACACTGCCTCTTTACGCTCTAGTCACACAGATGGGTTCGACAATGAAGCCAACAATTTTCAACGAAAGAGTAGCAACGGCGTTGAGAAACTGGCACCACACGGCTCGCAAACACATAAAGCAAAATCGGGGGTCGGTGACGCCGATGTCGAGTCGGCCGGCGACGCCGTCGCACCACATGTCGCCGGTGCACCTCCTCCGCCACTACCGGAGCGAATTGGACAGTGTCCACACCTCTCCCAGAAGGTCCAATTTCGACAACGACCAGTGGGACCCGGACTCCCCGTCGCCGTCGCACCACTTCCACCGCCACCCCCACGGCGGCGACGGCTCCAGTTCCTACAGCCACCACCACCCCCGCGACGTGGAGGCCGTCGATTTCGACGCCGATAGGGATTCGCTCCAACCCGAAACGACCCAGGCCCCGGATCCGGATGTTCAACGGACGAATATTAATTCGGATCAGCATGAGATTGATGTGGGCCCGAAGGAATTCTCGTTTGATAGAAGAGTTGATAGAGTATGA 1683 50.45 MAGGGAGRSLEETPTWAVAVVCFVLVLISIIIEHILHLIGKWLKKKHKRALYEALEKIKSELMLLGFISLLLTVGQSLITNICIPPEVAATWHPCSPQKELELTKQDDLVDSDNNRRKLLAVSPANATFRRVLAAAGGTDKCAEKGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKVYEKLEVVGKGNQNRGVPILTRSGTISICKRYVVWEKAFELLDEIALLNLDCKIISSHLLFLFFFYHLDPPIWFFAVLFLLFNTHGWRAYLWLPFVPLIIVLLVGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHTEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVATALRNWHHTARKHIKQNRGSVTPMSSRPATPSHHMSPVHLLRHYRSELDSVHTSPRRSNFDNDQWDPDSPSPSHHFHRHPHGGDGSSSYSHHHPRDVEAVDFDADRDSLQPETTQAPDPDVQRTNINSDQHEIDVGPKEFSFDRRVDRV 560
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 45201927 45208747 + Maker00001366 Lcy8g1891 640783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g1891 560 MobiDBLite consensus disorder prediction 427 443 - -
Lcy8g1891 560 MobiDBLite consensus disorder prediction 543 560 - -
Lcy8g1891 560 MobiDBLite consensus disorder prediction 422 446 - -
Lcy8g1891 560 Pfam Mlo family 7 186 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy8g1891 560 Pfam Mlo family 253 455 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy8g1891 560 MobiDBLite consensus disorder prediction 460 519 - -
Lcy8g1891 560 PANTHER MLO-LIKE PROTEIN 1 251 489 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy8g1891 560 MobiDBLite consensus disorder prediction 520 542 - -
Lcy8g1891 560 MobiDBLite consensus disorder prediction 460 560 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0297 Lcy-Chr11:4760616 Lcy8g1891 Lcy-Chr8:45201927 3.25E-209 dispersed
Lcy8g0111 Lcy-Chr8:2592769 Lcy8g1891 Lcy-Chr8:45201927 6.47E-34 dispersed
Lcy8g1393 Lcy-Chr8:40634048 Lcy8g1891 Lcy-Chr8:45201927 2.31E-37 dispersed
Lcy8g1891 Lcy-Chr8:45201927 Lcy9g1288 Lcy-Chr9:37572574 6.46E-35 dispersed
Lcy7g0665 Lcy-Chr7:6142794 Lcy8g1891 Lcy-Chr8:45201927 3.28E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g1891 K08472 - csv:101217225 641.728