Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy8g1911 | ATGTACCCTCGACTAAGAGACCCAGTTTCTGTTTTGGACTGTCTCTCTGTCGCTCTCGTTCCGTCTCTTTCTCATACTCATGGAAGCGCTTCTTCTGGGTTGATTCCATTAGAACTGCAGCCAAAGGTTTCATTTGGGAAGATCTTTATGGCTTATGGTAGTTCTAGATCCGTAAGATTCCAAGATGATCTTGAATCATCTACCCTGCCTACTATCAATGGTGGTGGTGTGAAGAAGATCATATACAACATTGATGGCTCACAAATACCGGAATCGAGCGGCAAGAGAACTGAGGTTTCTGGGAAGTCTGGAAGATCCTTGAGAGCGAAAGTTTTGTCTAGAGTTTTCTCTGAGGATTATGAGAGAGTGCAGAGAAAAATATTGGATCCTAGGGGACAAGCCATAAGGCGATGGAATAAGATATTTTTAGTAGCTTGTTTAGTCTCTTTGTTTGTAGACCCGCTTTTCTTTTACTTGCCTGTGGTCCGGAATGAGGTCTGCATCGATATAGGAGTAGGTCTCGAAGTCGTCCTCACAACTATAAGATCAATAGCTGATGTTTTCTACACAATTCAGATTTTCATTAAGTTCCGTACAGCTTATGTTGCGCCCTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTTATAGATCCTTGTAAGATAGCAATAAGGTATCTACGCCATGGTTTCTGGATTGATTTCATTGCAGCCGTGCCAGTTCCTCAGGTACTGATCTGGATTGTCATCCCCAACCTTAGTGGTTCAACAATGACAAACACCAAGAACTTCCTAAGGTTCTTTCTCATATTCCAGTACCTGCCGAGGCTTTTTCTCATATTTCCTCTCTCAACACAAATTGTTAAGGCCACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACCTGATTCTTTATATGTTGGCAAGCCATGTTTTAGGAGCCTGCTGGTACCTTCTTTCAATCGAGCGACAAGAAGCTTGCTGGAGAAGGCTTTGCAAGTTTGACAAATCTTGTAAAGATGGATTCTTCGACTGTCATAAGGCCGATGACCCTCAAAGGGACTCATGGTTTAAGACAAGTAACATTACGAGTTCCTGCAATCCAAATGATCCCTTTTATCAATTTGGTATATACGGTGATGCGATAACTTTTGATGTCACAACCTCACCATTTTTCAACAAGTACTTCTACTGTCTTTGGTGGGGCCTGAAAAATCTGAGTTCCTTGGGGCAAAATCTAGCCACAAGCACTTTTGTTGGGGAAATAATATTTGCCATAATAGTGGCAACTCTTGGACTGGTTTTGTTTGCATTGCTCATTGGCAATATGCAGAAATACCTCCAATCGACGACTGTTCGGTTAGAAGAGTGGAGAATAAGGAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAGCTCAGACAATCTGTCCGCAGATATGATCAGTACAAGTGGGTAGCAACTCGAGGAGTCGATGAAGAAGCCCTGCTTAGAAGCCTTCCATTGGACCTACGAAGAGACATAAAACGTCATCTTTGCCTCGACCTCGTTCGAAGGGTTCCATTGTTTGATCAAATGGATGAAAGAATGCTAGACGCAATATGCGAAAGGCTCAAACCTGCCTTGAGCACAGAAGGCACATTTCTCGTGCGAGAAGGCGACCCGGTCAATGAAATGCTATTCATAATCAGAGGTCATCTCGATTCATACACCACTAATGGCGGTAGAACTGGATTTTTCAACTCCTGTCGTATCGGCCCAGGTGATTTCTGTGGTGAGGAACTGCTGACTTGGGCTCTCGATCCTCGTCCAAGCGTTGTACTTCCTTCTTCCACTCGGACGGTCAAAGCCATATCTGAAGTAGAAGCATTTGCTCTCATAGCAGAGGACTTGAAATTTGTATCCTCCCAGTTCAGAAGACTCCACAGCAAACAACTCAGACACAAGTTCCGATTCTACTCACATCAATGGCGAACATGGGCTGCGTGCTTTGTCCAAGCAGCGTGGCGGCGATATAAGAGACGTAAGGAAAGAGCTGAGCTCAGGGCTAGAGAGAGCTATCCAGCTACGAAGCTCGAGTCCCCACTTTCACCACAGACTGCATCAAACGTGGATGCACGTTCAGGAAACGCTAGAAGAGGCATGAATAAGCGTTGTGCGTCGGATGCTGGAGTCGTAAGCTCGTTGCAGAAGCCAGAAGAGCCTGACTTCTCCATTGTTGAGGAATGA | 2250 | 44.84 | MYPRLRDPVSVLDCLSVALVPSLSHTHGSASSGLIPLELQPKVSFGKIFMAYGSSRSVRFQDDLESSTLPTINGGGVKKIIYNIDGSQIPESSGKRTEVSGKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQAIRRWNKIFLVACLVSLFVDPLFFYLPVVRNEVCIDIGVGLEVVLTTIRSIADVFYTIQIFIKFRTAYVAPSSRVFGRGELVIDPCKIAIRYLRHGFWIDFIAAVPVPQVLIWIVIPNLSGSTMTNTKNFLRFFLIFQYLPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRRLCKFDKSCKDGFFDCHKADDPQRDSWFKTSNITSSCNPNDPFYQFGIYGDAITFDVTTSPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIIFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEEALLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKERAELRARESYPATKLESPLSPQTASNVDARSGNARRGMNKRCASDAGVVSSLQKPEEPDFSIVEE | 749 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 45376747 | 45382783 | - | Maker00001509 | Lcy8g1911 | 640803 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy8g1911 | 749 | MobiDBLite | consensus disorder prediction | 691 | 749 | - | - | |
Lcy8g1911 | 749 | FunFam | Cyclic nucleotide-gated ion channel 1 | 527 | 645 | - | - | |
Lcy8g1911 | 749 | MobiDBLite | consensus disorder prediction | 699 | 716 | - | - | |
Lcy8g1911 | 749 | Gene3D | - | 137 | 453 | - | - | |
Lcy8g1911 | 749 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 529 | 626 | IPR000595 | - | |
Lcy8g1911 | 749 | FunFam | Cyclic nucleotide-gated ion channel 1 | 456 | 520 | - | - | |
Lcy8g1911 | 749 | SMART | cnmp_10 | 529 | 660 | IPR000595 | - | |
Lcy8g1911 | 749 | SUPERFAMILY | Voltage-gated potassium channels | 129 | 451 | - | - | |
Lcy8g1911 | 749 | SUPERFAMILY | cAMP-binding domain-like | 459 | 654 | IPR018490 | - | |
Lcy8g1911 | 749 | CDD | CAP_ED | 529 | 660 | IPR000595 | - | |
Lcy8g1911 | 749 | PRINTS | EAG/ELK/ERG potassium channel family signature | 193 | 202 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Lcy8g1911 | 749 | PRINTS | EAG/ELK/ERG potassium channel family signature | 398 | 415 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Lcy8g1911 | 749 | PRINTS | EAG/ELK/ERG potassium channel family signature | 424 | 435 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Lcy8g1911 | 749 | PRINTS | EAG/ELK/ERG potassium channel family signature | 492 | 499 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Lcy8g1911 | 749 | PRINTS | EAG/ELK/ERG potassium channel family signature | 442 | 451 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Lcy8g1911 | 749 | PRINTS | EAG/ELK/ERG potassium channel family signature | 310 | 320 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Lcy8g1911 | 749 | Gene3D | Jelly Rolls | 527 | 647 | IPR014710 | - | |
Lcy8g1911 | 749 | Pfam | Ion transport protein | 137 | 456 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Lcy8g1911 | 749 | Gene3D | Helix hairpin bin | 456 | 520 | - | - | |
Lcy8g1911 | 749 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 107 | 711 | - | - | |
Lcy8g1911 | 749 | Pfam | Cyclic nucleotide-binding domain | 552 | 612 | IPR000595 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g0256 | Lcy-Chr10:4165205 | Lcy8g1911 | Lcy-Chr8:45376747 | 5.71E-215 | dispersed | |
Lcy11g2043 | Lcy-Chr11:44079285 | Lcy8g1911 | Lcy-Chr8:45376747 | 1.91E-147 | dispersed | |
Lcy12g0123 | Lcy-Chr12:1551768 | Lcy8g1911 | Lcy-Chr8:45376747 | 2.46E-233 | dispersed | |
Lcy4g1736 | Lcy-Chr4:43233405 | Lcy8g1911 | Lcy-Chr8:45376747 | 1.70E-43 | dispersed | |
Lcy6g0087 | Lcy-Chr6:819610 | Lcy8g1911 | Lcy-Chr8:45376747 | 1.49E-123 | dispersed | |
Lcy7g1904 | Lcy-Chr7:43897904 | Lcy8g1911 | Lcy-Chr8:45376747 | 1.21E-66 | dispersed | |
Lcy8g1911 | Lcy-Chr8:45376747 | Lcy9g1763 | Lcy-Chr9:42827391 | 1.32E-256 | dispersed | |
Lcy6g0312 | Lcy-Chr6:2939425 | Lcy8g1911 | Lcy-Chr8:45376747 | 4.97E-113 | transposed | |
Lcy6g1250 | Lcy-Chr6:15082756 | Lcy8g1911 | Lcy-Chr8:45376747 | 3.91E-123 | transposed | |
Lcy1g1365 | Lcy-Chr1:13200281 | Lcy8g1911 | Lcy-Chr8:45376747 | 1.37E-296 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy8g1911 | K05391 | - | csv:101210775 | 1339.71 |