Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g2068 ATGGTGAAGAATCGTCATCCCATCGTGATTCAGCTCATGGCGGCTCTTCTCGCCGCCGTTTGCTCGTCAACGTTTTGCGATTCTGGAAACATTCGCGAAAGAAAATTAAACATTGTGTACATGGGATCTATCGGAAACAGGGGAGCGGCGCAATTATCATCTAGCCATTTGAATCTGCTCGAATCGGTCGTCGGAACTGCATCTGAAACAGAGCATTTGATGGTTAGAAGTTACAAAAGGAGCTTCAATGGCTTCGCTGCTCAGCTCACTGACAGCGAAGGAGAAAAGCTCGCCGCCATGAATGGGGTGATCTCTGTTTTTCCAAGCAAGGAACTCAAACCCCAAACCACAAGATCATGGGATTTTGTGGGTCTTCGTCAAAAAGCCAAGAGAAATCTCGTCAGTGAAAGCGACATCATAATTGGATCCTTGGACACCGGAATTTGGCCGGAATCAGAGAGCTTTAAAGATGTGGGTCTCGGCCCGCCGCCGCAGCGGTGGAAAGGCACCTGCGCCGGCGGAGCAAATTTCACTTGCAACAACAAGCTCATCGGCGCACGTTATTACTCAGCTTCATCATCAGCCAGAGACAGTACCGGGCATGGAACTCACACCGCCTCCACCGCCGCCGGAAGTCCAGTTGCAGGCGCTGAATTTTTCGGATTAGCCGCCGGAGTTGCAAGAGGAGCCGTCCCTTCTGCGAGAATCGCCGCTTACAAAGTCTGCGAATCCCGTTGCCATGAAGCCGATGTGTTGGCGGCGTTCGACGACGCCATCGCCGACGGAGTTGATCTGATTACAATTTCACTCGGTGGGTCTGGTGGATCCGCGTTTAAATTCGACGCCATCGCAATTGGGTCATTTCACGCCATGACTAAAGGAATCCTCACCGTCCAAGCCGCCGGAAACAGTGGTCCGGCGGCGAGTACACTTTTTAGCTCAGCTCCATGGCTCTTCACCATCGGAGCGACAACTACAGACAGAAGCATCGTTGACAGAGTCGTCCTCGGCAATGGCAAAACTGTAACTGGCTATACTGTAAACTCCTTCCCTCCAAATCCAAACGCTCTTCCATTGATTTACGCAACAAATGCTTCAAGAACTTGCCCTCGATCTCAATCTGAAACATGCCGGCCAGGATGTCTCGATTCAGAGCTCGTCAAGGGGAAAATCGTTCAATGTATGACTTATAACGGAGCTTCTGAAGCTCTCAGCGCCGGAGCTGCCGGAGCAATCGTTCTGAATGACAATTTGGTAAATATTTCAACTGTCGTTCCATTTCCGATGACGGCCGTCAACGTCATAGATTACGGCGACGTCGCGAATTACGCCACCTCTGTTCAAAACCCAACTGCAAGAATTCTCAAAAGTCAAGCCATTAAAGACGTCTCTGCTCCGCGTGTGGCTGTATTCTCCAGCCGCGGCCCGAACACGGTGATGCCGGAGATCATGAAGCCCGACGTCTCCGCTCCCGGCGTCGAAATCCTCGCCGCCTTTCCGCCTACGATGTCGCCTGCCGAGCTTCCTGGGTTTAAAAAATTTGTCAACTACTCCATAATGTCTGGAACTTCCATGTCTTGCCCTCACGTCGCCGGTGTCGCGGCGTACCTGAAGAGCTTTCGTCGAGATTGGTCGCCGTCGGCGATCAAGTCCGCTATCATGACGACGGCGAAACCGATCACGAGCACCGACGGCACGATCATCGGAGAGTTTCTTCATGGGTCAGGCCTAATCAATCCAAAGGAGGCCCTCAAACCTGGCCTTGTTTATGAAACTTCAAAAGAAGATTACATAAACTTGCTGTGTGGAAATGGGTATGATTCAAAGGATATTCAGCTCATGTCGGGAGATTTTAACAGTAGCTGTTCATCAAATGTGACGAATTTTCCCGCTAGAGATTTGAATTACCCTGCAATGGTGGCTCAAGTTTTACCGACGCAGGCATTTGTGGTAAAATTTGTGAGAATAGTTACCAATGTTGGGGATGGAAAATCGAGTTACAAGGCAGAATTTTTACCGTTTACTAAAGTTTACTTGACCAAGTCAGCTGAAAAGCTCAATGCGAGCGTTGAGCCTCAAGAGCTGACGTTTGGAGCAGTAAATGAGAAGAAGAGTTTTACTGTGACGGTGGCCGGAGGGTTAATTCCTGATGGAACGGTGTTTTCTACTGCATTAGTTTGGAGTGATGGGATCCACAAGGTGAGGAGTCCGATCGTTGTGCAAGTCAAATCACAATCAACTACTCCTACAAATTAA 2256 49.73 MVKNRHPIVIQLMAALLAAVCSSTFCDSGNIRERKLNIVYMGSIGNRGAAQLSSSHLNLLESVVGTASETEHLMVRSYKRSFNGFAAQLTDSEGEKLAAMNGVISVFPSKELKPQTTRSWDFVGLRQKAKRNLVSESDIIIGSLDTGIWPESESFKDVGLGPPPQRWKGTCAGGANFTCNNKLIGARYYSASSSARDSTGHGTHTASTAAGSPVAGAEFFGLAAGVARGAVPSARIAAYKVCESRCHEADVLAAFDDAIADGVDLITISLGGSGGSAFKFDAIAIGSFHAMTKGILTVQAAGNSGPAASTLFSSAPWLFTIGATTTDRSIVDRVVLGNGKTVTGYTVNSFPPNPNALPLIYATNASRTCPRSQSETCRPGCLDSELVKGKIVQCMTYNGASEALSAGAAGAIVLNDNLVNISTVVPFPMTAVNVIDYGDVANYATSVQNPTARILKSQAIKDVSAPRVAVFSSRGPNTVMPEIMKPDVSAPGVEILAAFPPTMSPAELPGFKKFVNYSIMSGTSMSCPHVAGVAAYLKSFRRDWSPSAIKSAIMTTAKPITSTDGTIIGEFLHGSGLINPKEALKPGLVYETSKEDYINLLCGNGYDSKDIQLMSGDFNSSCSSNVTNFPARDLNYPAMVAQVLPTQAFVVKFVRIVTNVGDGKSSYKAEFLPFTKVYLTKSAEKLNASVEPQELTFGAVNEKKSFTVTVAGGLIPDGTVFSTALVWSDGIHKVRSPIVVQVKSQSTTPTN 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 46889792 46892047 + Maker00001123 Lcy8g2068 640960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g2068 751 ProSitePatterns Serine proteases, subtilase family, serine active site. 522 532 IPR023828 -
Lcy8g2068 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 739 IPR045051 -
Lcy8g2068 751 SUPERFAMILY Subtilisin-like 115 588 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy8g2068 751 Gene3D Peptidase S8/S53 domain 138 597 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy8g2068 751 Pfam Fibronectin type-III domain 633 740 IPR041469 -
Lcy8g2068 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 114 IPR037045 -
Lcy8g2068 751 CDD PA_subtilisin_like 334 454 - -
Lcy8g2068 751 Gene3D - 327 461 - -
Lcy8g2068 751 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Lcy8g2068 751 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Lcy8g2068 751 PRINTS Subtilisin serine protease family (S8) signature 521 537 IPR015500 -
Lcy8g2068 751 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Lcy8g2068 751 CDD Peptidases_S8_3 112 557 IPR034197 -
Lcy8g2068 751 Gene3D - 601 743 - -
Lcy8g2068 751 ProSiteProfiles Serine proteases, subtilase domain profile. 119 584 - -
Lcy8g2068 751 Pfam Subtilase family 137 563 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g2068 Lcy-Chr8:46889792 Lcy9g2281 Lcy-Chr9:47238638 4.58E-143 dispersed
Lcy8g2068 Lcy-Chr8:46889792 Lcy9g0404 Lcy-Chr9:11378610 1.18E-187 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g2068 - - - 0.0