Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g2095 ATGGCCTCTCTGGCGCTTACTTCCTCGTATCTCCCTTCGCTCCGGTCGCGCCTTCCGAAATCGGAATCAAATGCTCGAATCCGTTGCTCATCTCTCCGTTCGAGTCTTCCTAAACCCGCCATTTTCGGGAGCGGTGTCAGAACTAGCTTCCGCATTCCGTCTTCTCCATCCAATGAAGCTAAATTCGTTAAACCAGCTCTGGATTTCGGAAGCTCTCGTGGGAATCTCGGTGGCTTTACTGTCCGAGCGGCTTCCTCTTCTTCAGCTGCTGTAGCTCCGGCTTCTCAGCCATGGCAAGGTGCGGCGATTAAGCCACTTATTGCTTCCATTGCTACGGGTATTATTCTGTGGTTTGTTCCGGTGCCGTCTGGTGTTTCTCGGAATGCGTGGCAATTGCTCGCGATTTTCCTTGCTACAATTGTTGGGATCATTACTCAGCCCTTGCCTCTTGGTGCTGTTGCTTTGCTTGGACTTGGCGCCTCCGTTCTGACTAAAACCCTAACCTTCTCTGCTGCTTTCTCTGCTTTTGGTGATCCTATCCCATGGCTCATTGCTCTCGCCTTCTTCTTCGCTCGAGGGTTCATCAAGACCGGGCTTGGTAATCGAATTGCTTATCAATTTGTTTCTCTATTCGGTAGTTCGTCTTTAGGGTTAGGGTATAGTTTAGTGTTCAGTGAGGCCCTGTTGGCGCCGGCAATTCCTTCGGTGTCGGCCAGAGCAGGAGGGATATTCCTTCCACTGGTGAAATCTCTCTGTGTTGCTTGCGGTAGCAATGTTGGTGATGGGACGGAGAACCGGTTGGGATCGTGGTTGATGCTCACTTGCTTTCAAACTTCGGTGATTTCATCATCCATGTTCTTGACGGCCATGGCTGCCAATCCTCTGAGTGCTACTCTGACGTATAACACGATTAAGCAGACGATTGGATGGACCGATTGGGCCAAAGCAGCAATTGTTCCGGGATTGATCTCCTTGATTGTGGTGCCATTGCTTTTGTATGTGATCTATCCGCCCACGGTGAAGAGCAGTCCAGACGCACCAAAGCTTGCGAGAGAGAATTTGGAAAAGATGGGACCAATGACTAAAAATGAGATTATAATGGCTGGAACTCTGCTTCTCACGCAAGTGCAAATGGCATCACTCGCGTTACTCTGCCATAGTTTTCACATAATTGAGATGTTGAACTCTAGTGCTGAACCTTTTAGTAAGCTATTTCATTGTTTAGTGTACAAAATATGTTACTCTGTGGGTCTTTGGGTTTTTGGAGGGGTTCTTAATGTGGACGCTGTTACTGCTGCCATTTTGGGATTGTCCGTCCTTCTTGTGACTGGGGTTGTGACATGGAAAGAGTGCTTGGCAGAAGCTGTTGCCTGGGACACTCTAACATGGTTTGCTGCACTCATTGCAATGGCAGGGTATCTCAACAAATATGGTCTTATTTCCTGGTTCAGCCAAACTGTAGTGAAGTTTGTTGGTGGACTAGGCCTTTCATGGCAGCTTTCATTCGGCATTTTGGTTCTTCTCTATTTCTACTCCCACTACTTCTTTGCAAGTGGAGCTGCTCATATAGGCGCAATGTTTACAGCCTTCTTATCTGTTGCAAGTGCTTTGGGGACTCCCCCCTTCTTTGGAGCAATAGTACTTTCCTTCTTATCTAACCTGATGGGTGGCCTAACTCACTACGGCATTGGGTCAGCACCTGTGTTCTATGGTGCCAACTATGTTCCTCTTGCTCAATGGTGGGGCTACGGGTTCCTCATATCTGTTGTCAATATCATCATCTGGCTCGGCGCTGGGGGAATTTGGTGGAAGGCCATTGGTTTATGGTGA 1830 48.36 MASLALTSSYLPSLRSRLPKSESNARIRCSSLRSSLPKPAIFGSGVRTSFRIPSSPSNEAKFVKPALDFGSSRGNLGGFTVRAASSSSAAVAPASQPWQGAAIKPLIASIATGIILWFVPVPSGVSRNAWQLLAIFLATIVGIITQPLPLGAVALLGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENRLGSWLMLTCFQTSVISSSMFLTAMAANPLSATLTYNTIKQTIGWTDWAKAAIVPGLISLIVVPLLLYVIYPPTVKSSPDAPKLARENLEKMGPMTKNEIIMAGTLLLTQVQMASLALLCHSFHIIEMLNSSAEPFSKLFHCLVYKICYSVGLWVFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLAEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAQWWGYGFLISVVNIIIWLGAGGIWWKAIGLW 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47132526 47137073 - Maker00001392 Lcy8g2095 640987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g2095 609 CDD ArsB_NhaD_permease 140 603 - -
Lcy8g2095 609 Pfam Sodium:sulfate symporter transmembrane region 105 373 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy8g2095 609 Pfam Sodium:sulfate symporter transmembrane region 409 609 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy8g2095 609 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 14 374 IPR030676 GO:0005215(PANTHER)
Lcy8g2095 609 NCBIfam DASS family sodium-coupled anion symporter 120 375 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy6g0381 Lcy-Chr6:3577684 Lcy8g2095 Lcy-Chr8:47132526 4.15E-143 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g2095 - - - 0.0