Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy8g2145 | ATGGCTTCCCCTAAACTTACAGCCTTTGTGGTGGTCGTAGCTTTGATGCTGGGCAGCTCTCACGCGCTTAACCCTTTCTTCTACGCCTTCTCATGCCCTCAGCTGCCTTTTGTTGTACTAGACGTGGTCGCACAAGCTCTACAAACCGATGATCGAGCAGCTGCCAAGCTCATTCGTCTCCATTTTCACGACTGCTTCGCCAATGGTTGTGACGGGTCTGTGCTACTGGAGGACGTACCGGGCGTCATCGATAGTGAACTAAACGCACCTCCAAACAACGGCATCCAAGGGCTGGATATCGTGGACAACATCAAAGCAGCAGTTGAAAGCGCTTGCCCAGGCGTTGTTTCCTGTGCTGACATTTTAGCCCTCGCCTCTCAAATTTCTGTCGTATTGTCTGGTGGGCCGGCCTGGGTGGTTCTACTGGGAAGAAAAGACAGCAGAATAGCCAACAGAACCGCAGCCTCAAATCTTCCGAGTCCGTTCGAGACGCTGAATGTGCTGAAAGCGAAATTCGCAGCGTTTGGGCTTGATTCTACGGACCTGGTGACTCTGTCAGGAGCGCACACGTTCGGTCGAGCCAGATGCCTTTTCTTCAATGGGCGGTTCGACAACTTCAACAACACGGGCCTCCCAGACCCGACTCTGGACGCTGCTTACAGAGAGCAGCTTCGTCAAGCCTGCACCACCCCAACGACACGAGTAAACTTTGACCCAGTCACACCAGTCACATTCGACAAAAACTACTACATCAATCTTAGAAACCACAAGGGGCTTCTCCAAAGTGACCAAGAGCTTTTCTCCACGCCTGGGGCTGATACCACTGCCATTGTCAACACATTTGCCGCCAGCCAGCTTCTCTTCTTTATTCAATTTGGGAATTCCATGATCAAGATGGGCAATCTCGGCCCTCCACCTGGCACCCCATCCGAAGAATCTCCCTTTCCACTCCTTGTTCACAAAATCAAAACCCAATTGTTCTCGAACATGGCTTCCCCTAAACTCACAGCCTTTGCTGTTGTGGCGGCTCTGATGCTAGCGAGCTCTCACGCTCAGCTTAACCCTTTCTTCTACGCCTACACATGCCCTCAACTCCCTTTCATTGTTGCAGACGTGATTGCGCGAGCTCTACAAACTGACGAACGAGCAGCTGCCAAACTCATTCGCCTCCATTTCCACGACTGTTTCGTCAATGGGTGCGACGGTTCTGTGTTGCTTGAGGCTGCTGCGGGCATCGACAGTGAATTAGACGCACCCCCAAACAGTGGGATCCAAGGGCTGGACATCGTGGACAACATCAAAGCAGCACTCGAAACCTCTTGCCCAGGCGTTGTTTCATGCGCTGACATCTTAGCCATTTCTTCTCAAATCTCTGTTGTCTTGTCGGGAGGCCCATTTTGGTTAGCTCCACTGGGAAGAAAAGACAGCAGAATAGCCAACAAAACCGGGACCTCAAATCTTCCCGGTCCGTCAGAACCTCTTTCCGGACTTAAAGCCAAGTTTGGAGCTCTTGGGTTCGATTCTACGGATCTGGTGGCTCTATCAGGAGCACACACGTTCGGTAAAGCAAGATGCTTTTTCTTCAACGGCCGCTTCGACAACTTCAACAACACCGGAAAACCCGACCCGACGCTAGACCCGACTTACAGGGAGCAGCTTCGAGGACTATGTACTACCCCACAAACCCGAGTGAATTTCGACCCGACCACGCCAACAAAATTCGACAAAGCCTACTACTCCAATCTGCTGAGCCTGAAGGGGCTTCTCCAAAGTGACCAGGAGCTCTTCTCCACGCCCAAGGCCGATACCATAGCCATCGTGAAAAAATTCGCTGCCAACGAGAAGGCCTTCTTTAAACAATTTGTGGAATCCATGATCAAAATGGGGAATCTGAAGCCTCCATCGGGCATCAAATCAGAAGTCAGATTAAACTGCAGGAGGGTCAACCCGGTGAAGGCCTTTGATATTATGTAA | 1974 | 51.32 | MASPKLTAFVVVVALMLGSSHALNPFFYAFSCPQLPFVVLDVVAQALQTDDRAAAKLIRLHFHDCFANGCDGSVLLEDVPGVIDSELNAPPNNGIQGLDIVDNIKAAVESACPGVVSCADILALASQISVVLSGGPAWVVLLGRKDSRIANRTAASNLPSPFETLNVLKAKFAAFGLDSTDLVTLSGAHTFGRARCLFFNGRFDNFNNTGLPDPTLDAAYREQLRQACTTPTTRVNFDPVTPVTFDKNYYINLRNHKGLLQSDQELFSTPGADTTAIVNTFAASQLLFFIQFGNSMIKMGNLGPPPGTPSEESPFPLLVHKIKTQLFSNMASPKLTAFAVVAALMLASSHAQLNPFFYAYTCPQLPFIVADVIARALQTDERAAAKLIRLHFHDCFVNGCDGSVLLEAAAGIDSELDAPPNSGIQGLDIVDNIKAALETSCPGVVSCADILAISSQISVVLSGGPFWLAPLGRKDSRIANKTGTSNLPGPSEPLSGLKAKFGALGFDSTDLVALSGAHTFGKARCFFFNGRFDNFNNTGKPDPTLDPTYREQLRGLCTTPQTRVNFDPTTPTKFDKAYYSNLLSLKGLLQSDQELFSTPKADTIAIVKKFAANEKAFFKQFVESMIKMGNLKPPSGIKSEVRLNCRRVNPVKAFDIM | 657 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 47595930 | 47601120 | + | Maker00000733 | Lcy8g2145 | 641037 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy8g2145 | 657 | FunFam | Peroxidase | 356 | 497 | - | - | |
Lcy8g2145 | 657 | FunFam | Peroxidase | 159 | 299 | - | - | |
Lcy8g2145 | 657 | CDD | secretory_peroxidase | 23 | 311 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Lcy8g2145 | 657 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 510 | 520 | IPR019793 | - | |
Lcy8g2145 | 657 | Gene3D | - | 357 | 649 | - | - | |
Lcy8g2145 | 657 | ProSitePatterns | Peroxidases active site signature. | 54 | 65 | IPR019794 | GO:0004601(InterPro) | |
Lcy8g2145 | 657 | Gene3D | Peroxidase, domain 2 | 159 | 299 | - | - | |
Lcy8g2145 | 657 | Gene3D | Peroxidase, domain 2 | 488 | 628 | - | - | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 444 | 454 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 386 | 406 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 509 | 521 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 623 | 636 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 425 | 438 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 463 | 478 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 581 | 598 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 362 | 381 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Plant peroxidase signature | 565 | 580 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Haem peroxidase superfamily signature | 567 | 582 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Haem peroxidase superfamily signature | 116 | 133 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Haem peroxidase superfamily signature | 181 | 196 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Haem peroxidase superfamily signature | 134 | 146 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | PRINTS | Haem peroxidase superfamily signature | 54 | 68 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | ProSiteProfiles | Plant heme peroxidase family profile. | 22 | 311 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 311 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | SUPERFAMILY | Heme-dependent peroxidases | 352 | 650 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | Gene3D | - | 27 | 308 | - | - | |
Lcy8g2145 | 657 | Pfam | Peroxidase | 41 | 283 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | Pfam | Peroxidase | 369 | 613 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 181 | 191 | IPR019793 | - | |
Lcy8g2145 | 657 | ProSitePatterns | Peroxidases active site signature. | 384 | 395 | IPR019794 | GO:0004601(InterPro) | |
Lcy8g2145 | 657 | FunFam | Peroxidase | 488 | 628 | - | - | |
Lcy8g2145 | 657 | CDD | secretory_peroxidase | 352 | 648 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
Lcy8g2145 | 657 | PANTHER | PEROXIDASE 72-RELATED | 342 | 648 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Lcy8g2145 | 657 | ProSiteProfiles | Plant heme peroxidase family profile. | 352 | 649 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g2166 | Lcy-Chr10:45617250 | Lcy8g2145 | Lcy-Chr8:47595930 | 3.01E-126 | dispersed | |
Lcy2g0736 | Lcy-Chr2:6515072 | Lcy8g2145 | Lcy-Chr8:47595930 | 8.26E-154 | dispersed | |
Lcy8g2145 | Lcy-Chr8:47595930 | Lcy8g2148 | Lcy-Chr8:47619498 | 1.58E-125 | dispersed | |
Lcy8g2144 | Lcy-Chr8:47587957 | Lcy8g2145 | Lcy-Chr8:47595930 | 1.09E-143 | tandem | |
Lcy8g2145 | Lcy-Chr8:47595930 | Lcy8g2146 | Lcy-Chr8:47602993 | 5.21E-205 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy8g2145 | K00430 | - | csv:101211752 | 555.444 |