Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g2150 ATGGCTTCTTTTAAAGCTATTATTCCTTTGGTTTTGTGTTTCATGGTTGTGTCTGTTAGTGCTCAGCTCAGCTCCACTTTCTACGACACGACATGTCCCAATGTATCAAGCATTGTGCATGGTGTGGTCCAGAATGCTCTACAAAGTGATGACAGAGCTGGTGCCAAACTCATTCGTCTTCACTTCCACGATTGCTTCGTCGACGGATGTGATGGATCGGTTCTACTAGAGGATCAGGATGGCATAGTGAGTGAGTTGGGTGCGCCTGGTAACCAAGGCATCACAGGTTTCAATATTGTTAACGACATCAAAACTGCTGTTGAGAACGTTTGTCCTGGTGTTGTCTCTTGTGCTGACATTCTAGCCCTCGCTTCTCGAGACGCAGTCACCTTGGCGAGTGGGCAGGGTTGGACAGTTCAATTGGGGAGAAGAGATGGTACAACAGCAAATTTGGAAGGAGCCAGAAATAGGCTTCCAAGTCCTTTTGAGAATCTCACTCAACTTCAAGGAAAGTTCAGAGATGTCGGACTTGACGACACTACCGATCTCGTTGCTCTATCAGGTGCGCACACATTCGGGCGTTCAAGATGCATGTTTTTCAGCGGACGGCTAAACACTTCGAACCCAGACCCGACCCTGGACTCGACATACGCGGATCAGCTCCGGCAAGAGTGTCAGGCGGGGGGAAACACATTCGTGAACCTGGACCCAACCACACCCAACACATTCGACGGCAACTACTTCACAAATCTTCAGAACAACCGTGGACTTCTAACAAGTGACCAAGTTCTCTTCTCCACGGCCAATGCTCCAACTATCCGTATTGTCGACAGCTTCGCCGGCAGCCAGAGCGAATTCTTCTCCGCCTTCGCTCAGTCAATGATTAACATGGGAAATCTCGGCCCTGTGACTGGCACCAGCGGACAAATCAGGTGTAGAGAAGGAGCTGGAAGTGAAGTTGAAAAGGCCCTATGTCTTGTCTTGTTTCAGAAGACTTTGGAAGATGTGAAGAGGATGAGATAA 1023 48.88 MASFKAIIPLVLCFMVVSVSAQLSSTFYDTTCPNVSSIVHGVVQNALQSDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQDGIVSELGAPGNQGITGFNIVNDIKTAVENVCPGVVSCADILALASRDAVTLASGQGWTVQLGRRDGTTANLEGARNRLPSPFENLTQLQGKFRDVGLDDTTDLVALSGAHTFGRSRCMFFSGRLNTSNPDPTLDSTYADQLRQECQAGGNTFVNLDPTTPNTFDGNYFTNLQNNRGLLTSDQVLFSTANAPTIRIVDSFAGSQSEFFSAFAQSMINMGNLGPVTGTSGQIRCREGAGSEVEKALCLVLFQKTLEDVKRMR 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47639919 47643195 + Maker00001246 Lcy8g2150 641042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g2150 340 CDD secretory_peroxidase 22 313 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy8g2150 340 Gene3D - 27 312 - -
Lcy8g2150 340 ProSiteProfiles Plant heme peroxidase family profile. 22 311 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lcy8g2150 340 SUPERFAMILY Heme-dependent peroxidases 22 314 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Lcy8g2150 340 Gene3D Peroxidase, domain 2 159 297 - -
Lcy8g2150 340 FunFam Peroxidase 26 176 - -
Lcy8g2150 340 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 Pfam Peroxidase 40 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy8g2150 340 FunFam Peroxidase 159 297 - -
Lcy8g2150 340 PANTHER PEROXIDASE 72-RELATED 12 312 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g2148 Lcy-Chr8:47619498 Lcy8g2150 Lcy-Chr8:47639919 3.31E-117 dispersed
Lcy8g2150 Lcy-Chr8:47639919 Lcy3g1848 Lcy-Chr3:45652727 1.18E-66 dispersed
Lcy8g2149 Lcy-Chr8:47629152 Lcy8g2150 Lcy-Chr8:47639919 4.38E-146 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g2150 K00430 - csv:101212957 490.73