Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g2186 ATGTTAGAGCGTAATGAGATTCAGGAGCAACATGTTGAGGACAGAAAGAAGCTTAAGGTAGATTTGTTGGAGATCACGACAGAAGAGCAAAGAAGCCTCAATCAAAAGTGCAAGCTTAGATGGCTAAATGAGGGGGATGAAAATTCCTCTTTTTTCCATAAATGGGCTACAGCTAAGAAGAACAAAGCTTTTATTTCGGTTTTGGAGAAGGACAGTGGGGAAATTATCACCAGAGAAGTTGATATTGAGGCGTGCAGACTATGCCTCAAGGCCGAAGAGAGGTTAGACCATCTGTTCCTGCATTTTGGCTTTGCGGGTAAAGTTTGGAGTTTTATTGCCAAGAGTTTGGGCTTGTCTTTTTGTGTTCCTAGTATGATTGACGATTGGATGTATGAAGGCTTGGCTGCGGCTTTGCGGGTAAAGTTTGGAGTTTTATTGCCAAGAGTTTGGGCTTGTCTTTTTCCGGAGCAATTAAATAAAATCTTTGAGCTATGTGGTGCTCCGGATGAAGTCAATTGGCCTGGGGTTTCTAAAATCCCTTGGTACAACAATTTCAAGCCGACAAGGCCGATGAAGAGACGCATTAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAATTGTTGGAGAAGATGCTAACTCTGGATCCTTCTCAGGGTGACTGCGGCAAGAGGATATCTGCCAAGGATGCCCTAGATGCAGAATATTTTTGGACAGATCCATTACCTTGTGACCCTAAAAGTTTACCCAAGTATGAATCATCACACGAGTTCCAGACAAAGAAGAAGCGCCAACAGCAACGACAACATGAAGAAACTGCAAAGCGACAGAAATTGCAACACCCACAGCATTCACGCCTTCCACCTATTCAGCAGTCGGGGCAAGCACATGCACAGATGCGACCGGTACCAAACCAACCAATTCACGGGTCTCAACCACCAGTTGCTGCAGGCACTAGCCACCATTTTGGGAAGCCTCGTGGACCGCCAGGTCCTGGTAGGTATCCCTCAGGTGGGAATCCCCCTTCTGGATACAACCACCCAAGTCGTGGTGGTCAAGGTGGGGGTGGTTATGGCAACGCACAATATGCTCAAGGACGGGGTGCACCCTATGGGTCTGGTAACATGTCTGGTGCTGGTCCGAGAGGTGGAGCTGGAGGTGGTAGTGGTTATGGGGTGGGGGCTCCAAATTACCCTCAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGTCGTGGCTCCAATGTGATGGGTGGAAATCGAAACCAACAATATGGGTGGCAACAGTGA 1293 47.25 MLERNEIQEQHVEDRKKLKVDLLEITTEEQRSLNQKCKLRWLNEGDENSSFFHKWATAKKNKAFISVLEKDSGEIITREVDIEACRLCLKAEERLDHLFLHFGFAGKVWSFIAKSLGLSFCVPSMIDDWMYEGLAAALRVKFGVLLPRVWACLFPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRIREVFRHFDRHALELLEKMLTLDPSQGDCGKRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPQHSRLPPIQQSGQAHAQMRPVPNQPIHGSQPPVAAGTSHHFGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQGGGGYGNAQYAQGRGAPYGSGNMSGAGPRGGAGGGSGYGVGAPNYPQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 47926687 47932150 - Maker00000594 Lcy8g2186 641078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g2186 430 MobiDBLite consensus disorder prediction 251 280 - -
Lcy8g2186 430 Gene3D Transferase(Phosphotransferase) domain 1 142 278 - -
Lcy8g2186 430 MobiDBLite consensus disorder prediction 402 430 - -
Lcy8g2186 430 MobiDBLite consensus disorder prediction 285 301 - -
Lcy8g2186 430 MobiDBLite consensus disorder prediction 249 430 - -
Lcy8g2186 430 SUPERFAMILY Protein kinase-like (PK-like) 155 246 IPR011009 -
Lcy8g2186 430 PANTHER CELL DIVISION PROTEIN KINASE 156 238 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g1604 Lcy-Chr7:31282325 Lcy8g2186 Lcy-Chr8:47926687 1.25E-28 dispersed
Lcy7g1606 Lcy-Chr7:31291721 Lcy8g2186 Lcy-Chr8:47926687 1.25E-28 dispersed
Lcy8g2186 Lcy-Chr8:47926687 Lcy11g2132 Lcy-Chr11:44870206 1.32E-35 dispersed
Lcy8g2186 Lcy-Chr8:47926687 Lcy5g1356 Lcy-Chr5:32393205 2.51E-143 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g2186 K08819 - csv:101220936 451.055