Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy8g2223 ATGTACGGACTGCGAAATAAGAAATTGCGTGTGAATAACCTGGTACTTCATTTGGTTCTTCTCTTGAATGTTAATGTGTGTCTGAATTATATAATGCTGGATACTTTGTTGTGTGCTCTTTGGACTGCTGGTGAAGAAATTGATCTTAGGAGGGCAAATAACACTGAAATCATGCTAACAAAAGTTAGGATGCCACTATCGGACATGATGGAGTTGGTGGCAAATTTCAGATCTTTTTGTGCTGGTTCTCGTACTGCATTCTTACTGCCAATTATTACTGAAATTTCTCACGCAGCCGTACTCTTTATGGATGAGTCTGTATTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTCCCCCACCAAAGAGGAGATAGAGCTTCTCAAGGGATACTGTGGTGACAAGGATAAACTTGGAATGTGTGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTAGAGTCGAAGTTAAGAGTGTTCTCTTTCAAGATTCACTTCAGCTCTCAGATAGTAGAGTTCAGAAAAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTGAAGAATTCTTGCAAATTGAAGGAGATATTGAAGAGAATTCTTTGCCTGGGAAATATGCTGAACCAAAGAACTGCTAGGGGTAATTATGATATAACTCTTAGATGA 672 38.54 MYGLRNKKLRVNNLVLHLVLLLNVNVCLNYIMLDTLLCALWTAGEEIDLRRANNTEIMLTKVRMPLSDMMELVANFRSFCAGSRTAFLLPIITEISHAAVLFMDESVLDVDQVENLIKFSPTKEEIELLKGYCGDKDKLGMCEQYFLEMMQVPRVESKLRVFSFKIHFSSQIVEFRKSLNTVNSVCQEVKNSCKLKEILKRILCLGNMLNQRTARGNYDITLR 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 48384138 48387915 - Maker00000610 Lcy8g2223 641115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy8g2223 223 Gene3D Formin, FH2 domain 45 220 IPR042201 -
Lcy8g2223 223 SUPERFAMILY Formin homology 2 domain (FH2 domain) 47 217 - -
Lcy8g2223 223 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 223 IPR015425 -
Lcy8g2223 223 Pfam Formin Homology 2 Domain 47 217 IPR015425 -
Lcy8g2223 223 PANTHER FORMIN-J 47 217 IPR051144 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy8g2223 Lcy-Chr8:48384138 Lcy9g0003 Lcy-Chr9:97149 3.60E-79 dispersed
Lcy8g2223 Lcy-Chr8:48384138 Lcy8g2224 Lcy-Chr8:48457138 2.49E-46 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy8g2223 K28090 - csv:101221127 245.358