Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g0019 ATGCTCTTGTTGGCAAGTTGTAGGCTTAATTATTCTCATATTGTATGGAGCTTTTTATTTTTATTTTTTTTTTTTGACGAATTGGTGCACATTTTTGTGTTGAAATTATATGCTATCAGTGGTTTTATTTTCATCAATTGCTATTCTAGAAGGATTCTGAACTCTGATGTGGTCTTGACCTGCTATCGTTGTCTGAGTGCAGTCCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTGGAAAACCAATATGAAACATCCACAGGCATCCGAGGTTGTGAACAAGGACATAATATCTCACTTTGTTCTGCGCCTTGTATACTGCAGAACGGAAGACTTGAGAAAATGGTTCCTTTCTATGGAATCTATGCTATACCGACACCGTTTTCTTTCTGAAAGTCCTGAATCTCAAAAGTTGGTCTTTTCGGAGCTTGGCCTCTCGTACAAAGCAATCAGTAATGCAAAATTTGAGGTTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGTACCAACTGCTGATGCAATATACTACAAGGTCTCTAAAGTTATTCTTGTTGTGAGCTCATTCGGGGTTTGTAGAGCTCGTTATAGAGATGAGAGGTCTATGATGGAGGAGGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTCTCCATAAAGGATATGCGTACGTTGCTATTTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCAAAGGCTCTGAGTCTGACAAACAGGAAATGGACATCTACAGTTAGAGAACAAGAGAAAGATCGGTTGACCCCTATCGTAGAAGCCCTTTGCACAAGCTACTTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCTGATATATCAATAAAGGACATTGACCAAGTAGCTAAAAGTTCATTTCCTCTTTGCATGCGGCACCTTTTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTCAAGGTTGGTGTTGGTTTGAAGCTTGATGATGCCCTTGCCTTCTGGAAAGCTGAGTTCTCCCATAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGACATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCACCTTATTCCTGTCAAAAAATCATCTCATCATTGCCTGGTGTTGGAGATCATCATGGATGTCCCTATAGACATTTCAGCGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAATCGGACAATGGAAGATATAATGGACAAAGTGCGAATTAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGTCGTGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAAGTCCTGCAATATAAGGTAGACCATGTCCTCAATAAGTGA 1515 40.26 MLLLASCRLNYSHIVWSFLFLFFFFDELVHIFVLKLYAISGFIFINCYSRRILNSDVVLTCYRCLSAVLKGISDGLSRGKKSEEMEKLVRELWKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMESMLYRHRFLSESPESQKLVFSELGLSYKAISNAKFEVVKDKLVQVARLIGQPVPTADAIYYKVSKVILVVSSFGVCRARYRDERSMMEEVPWEEVPELVAGRRVFLHKGYAYVAIYQVVSLVATQFRSYLSKALSLTNRKWTSTVREQEKDRLTPIVEALCTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKVGVGLKLDDALAFWKAEFSHRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKIISSLPGVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRIRHYQLACTLTFESIHGSSCDAGINHPNQYFIDSQKVLQYKVDHVLNK 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 501505 512424 - Maker00021048 Lcy9g0019 641135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g0019 504 PANTHER DNA PRIMASE LARGE SUBUNIT 67 497 IPR007238 GO:0005658(PANTHER)|GO:0006269(PANTHER)|GO:0006269(InterPro)|GO:0006270(PANTHER)
Lcy9g0019 504 CDD PriL_PriS_Eukaryotic 108 490 IPR016558 -
Lcy9g0019 504 Gene3D - 65 294 - -
Lcy9g0019 504 Pfam Eukaryotic and archaeal DNA primase, large subunit 224 487 IPR007238 GO:0006269(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy3g1510 Lcy-Chr3:41977801 Lcy9g0019 Lcy-Chr9:501505 6.00E-303 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g0019 K02685 - csv:101217274 749.969