Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g0129 | ATGGGCTGCATTTGCTCAAGAGATTCCTCAGAACCAGAGGATAGCAGTCACAAAGAGTCTGAAATTGAAAAAGATTTGAACAAATCTTCAGTTCAGTTGGTTGCTCCGTCTCCCTCAAAAGGAGAGGACTTGTTGTTAGAGATTCAATTGTCAAGGCAGGCATCTAAAATAAATGGGGGTTCTGTTCATAAAACAAAGGCAAATGGAGGGTCTGTCCATCGACCAAAGGAGGATGATGAATCTGTGAATAAATCCCTAAAGGCTACAAAATCAAATAATGATAATGCTTCAGCAGGTAGAAAACAGCCCGACTTTTTTAGGTTTGCTAGCTTGTCTAAAGGGGCTGAAGCTGAACATGTCATGGCTGGATGGCCTTCATGGTTAGCTTCCGTTGCTGGAGAAGCCATCAAAGGGTGGGTGCCTCGTCGTGCTGACTCCTTTGAGAAGTTAGACAAAATTGGACAGGGAACTTACAGCAGTGTATATAAAGCCCGTGACCTTGAAACGGGTAAAACTGTGGCATTGAAAAAAGTGAGATTTGTAAATATGGATCCTGAAAGTGTCCGTTTTATGGCTAGGGAAATCTATATTTTGCGTAAACTTGATCATCCAAATGTTATGAAGCTTGAGGGTCTAGTCACTTCCAGAATGTCGGGCAGCTTGTACCTTGTTTTTGAGTACATGGAGCATGACCTTGCAGGCCTTGCTGCAGCTCCTGGACATAAGTTTACTGAGGCTCAGATTAAATGTTACGTGCAACAATTGTTTCATGGACTCGAACATTGTCATAGTCGGGGAGTTTTGCACCGGGATATCAAAGGTTCAAATCTTCTCATTGACAATAATGGTGTGCTCAAGATTGGAGACTTTGGTCTTGCTACCTTTTTTCAGTCCGATCAAAAGCAGCCATTGACAAGTCGTGTAGTGACATTGTGGTACAGGGCACCTGAGCTTTTGCTTGGTGCTACTGAATATGGACCCGCCATAGATCTCTGGAGCTGTGGCTGTATTGTTGCCGAACTATTTGCTGGAAAACCTATTATGCCGGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTCTGTGGTTCACCATCTGAGGAGTTCTGGCGGAGAACAAAGTTGCCACATGCAACCAGCTTCAAACCTCAACACCGTTATAAAAGCTGCCTTTCTGAGACTTTTAAAAGCTTCCCTTCTTCAGCTCTGGCTCTTGTTACTAAACTACTTGCTATTGAACCAGAGCACAGAGGATCGGCTACTTTAGCTCTCAGAAGTGAGGTTTTGCAGTTTTTCAGAACAGAACCTCTCCCTTGTGACCCGTCAAGCTTACCGAAATATCCTCCGAGCAAGGAATTTGATGCCAAGCTGCGAAATGAAGAAGAAAGAAAGAAAAAAGCCGAAGCTGTGAAGGGACGTCATCCCGAATCTGTAAGAAGGGGCTCAAGAGACACCAAGGCAGTTCCAACTCCCGAATTCAGTGCTCAAGGAGACATCACGATAAAGGTACACCCGATCGCGAAAAAGACGAATACTAAGTACATCCCTCAAGAGGACAGTGAGCCTTCGAGAGTTGTGCAAAGTCGATTTGCCCACTCAACGTCTATGGTGCACCCAAGCATTGCAGGTTCATGGAGTAAGCCTACCGGAGCCTCGAGAAATTTTGTAGAGTTAAAGACACAGAAATCTCAGATGCATCAGTTAGTGGCAGATTTGTCAGCCTCTTCTCTCAAGAAGGAAGACTCAGTGTCTGCTAAAGATCCTGGAATGGGTTATGTTCAAAAGAAGAACCGAATACATTACTCGGGACCGTTAGTGCCTCCAGGAGGAACCATTGAAGAGATGCTGAAAGAGCACGAGAGACAAATCCAGCAAGCTTTTCGAAAGGCACGAATCGACAAAGCGAAGACAAACAAGAGTTATGGTGATCAGCTTTGA | 1944 | 44.44 | MGCICSRDSSEPEDSSHKESEIEKDLNKSSVQLVAPSPSKGEDLLLEIQLSRQASKINGGSVHKTKANGGSVHRPKEDDESVNKSLKATKSNNDNASAGRKQPDFFRFASLSKGAEAEHVMAGWPSWLASVAGEAIKGWVPRRADSFEKLDKIGQGTYSSVYKARDLETGKTVALKKVRFVNMDPESVRFMAREIYILRKLDHPNVMKLEGLVTSRMSGSLYLVFEYMEHDLAGLAAAPGHKFTEAQIKCYVQQLFHGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATFFQSDQKQPLTSRVVTLWYRAPELLLGATEYGPAIDLWSCGCIVAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEFWRRTKLPHATSFKPQHRYKSCLSETFKSFPSSALALVTKLLAIEPEHRGSATLALRSEVLQFFRTEPLPCDPSSLPKYPPSKEFDAKLRNEEERKKKAEAVKGRHPESVRRGSRDTKAVPTPEFSAQGDITIKVHPIAKKTNTKYIPQEDSEPSRVVQSRFAHSTSMVHPSIAGSWSKPTGASRNFVELKTQKSQMHQLVADLSASSLKKEDSVSAKDPGMGYVQKKNRIHYSGPLVPPGGTIEEMLKEHERQIQQAFRKARIDKAKTNKSYGDQL | 647 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2818138 | 2823957 | - | Maker00020913 | Lcy9g0129 | 641245 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g0129 | 647 | MobiDBLite | consensus disorder prediction | 463 | 488 | - | - | |
Lcy9g0129 | 647 | MobiDBLite | consensus disorder prediction | 463 | 493 | - | - | |
Lcy9g0129 | 647 | MobiDBLite | consensus disorder prediction | 10 | 26 | - | - | |
Lcy9g0129 | 647 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 267 | 279 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy9g0129 | 647 | ProSitePatterns | Protein kinases ATP-binding region signature. | 153 | 176 | IPR017441 | GO:0005524(InterPro) | |
Lcy9g0129 | 647 | SMART | serkin_6 | 147 | 434 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g0129 | 647 | CDD | STKc_CDK9_like | 147 | 434 | - | - | |
Lcy9g0129 | 647 | Pfam | Protein kinase domain | 147 | 429 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g0129 | 647 | SUPERFAMILY | Protein kinase-like (PK-like) | 140 | 431 | IPR011009 | - | |
Lcy9g0129 | 647 | Gene3D | Transferase(Phosphotransferase) domain 1 | 230 | 474 | - | - | |
Lcy9g0129 | 647 | Coils | Coil | 452 | 472 | - | - | |
Lcy9g0129 | 647 | Gene3D | Phosphorylase Kinase; domain 1 | 134 | 229 | - | - | |
Lcy9g0129 | 647 | PANTHER | CELL DIVISION PROTEIN KINASE | 146 | 430 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Lcy9g0129 | 647 | Coils | Coil | 618 | 638 | - | - | |
Lcy9g0129 | 647 | MobiDBLite | consensus disorder prediction | 70 | 85 | - | - | |
Lcy9g0129 | 647 | FunFam | probable serine/threonine-protein kinase At1g54610 | 230 | 474 | - | - | |
Lcy9g0129 | 647 | FunFam | probable serine/threonine-protein kinase At1g54610 | 134 | 229 | - | - | |
Lcy9g0129 | 647 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Lcy9g0129 | 647 | ProSiteProfiles | Protein kinase domain profile. | 147 | 434 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy9g0129 | 647 | MobiDBLite | consensus disorder prediction | 56 | 99 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g1705 | Lcy-Chr13:36024367 | Lcy9g0129 | Lcy-Chr9:2818138 | 7.44E-73 | dispersed | |
Lcy8g1543 | Lcy-Chr8:42059683 | Lcy9g0129 | Lcy-Chr9:2818138 | 1.34E-173 | dispersed | |
Lcy8g1544 | Lcy-Chr8:42067045 | Lcy9g0129 | Lcy-Chr9:2818138 | 2.01E-181 | dispersed | |
Lcy8g1622 | Lcy-Chr8:42791873 | Lcy9g0129 | Lcy-Chr9:2818138 | 6.93E-36 | dispersed | |
Lcy8g2188 | Lcy-Chr8:47937030 | Lcy9g0129 | Lcy-Chr9:2818138 | 1.87E-71 | dispersed | |
Lcy9g0129 | Lcy-Chr9:2818138 | Lcy9g0607 | Lcy-Chr9:20148016 | 1.30E-142 | dispersed | |
Lcy9g0129 | Lcy-Chr9:2818138 | Lcy7g1665 | Lcy-Chr7:32912490 | 1.07E-206 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66164 | None | None | None | None | Lcy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g0129 | K08819 | - | csv:101208709 | 1160.21 |