Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy9g0152 | ATGGACAAGGCGTCGTTGCTCGGCGATGCCGTTTCGTACATCAACGAGCTGAAATCGAAGCTCCAAATCGCGAAATTGGAGAAGACGAAGATGGGAAAACAGCTGGAGTTTCTGAAGAAGGACATGGGAGGGAAAGATCTCGGAAACTACACGAACCCCATCGATCAAGATCTGAAAATCGGGAACAGAAAGGCGATGGAGATCGAGATCGACGTGAAAATCATGGGTTGGGACGCGATGATCAGAATCCAGTGCAGTAAAAAGAATCACCCGACGGCGAGATTGATGCCGGCGTTGAAGGATTTGGATTTGGAAATGGTTCACGCCAGCGTTTCTGTGGTGAACGATCTGATGATTCAACAGGCAGCCGTGAAGATGGGAAGCAGATTTTACACACAGGAGCAGCTGAAAATGGCCCTCGTGGCCCGCGACGGCGGCGGCGACCATGGAATGATGTACAGAAGAACAGGGGTTGTGTAA | 480 | 50.62 | MDKASLLGDAVSYINELKSKLQIAKLEKTKMGKQLEFLKKDMGGKDLGNYTNPIDQDLKIGNRKAMEIEIDVKIMGWDAMIRIQCSKKNHPTARLMPALKDLDLEMVHASVSVVNDLMIQQAAVKMGSRFYTQEQLKMALVARDGGGDHGMMYRRTGVV | 159 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3319542 | 3320021 | + | Maker00020996 | Lcy9g0152 | 641268 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy9g0152 | 159 | Pfam | Plant bHLH transcription factor, ACT-like domain | 70 | 139 | IPR054502 | - | |
Lcy9g0152 | 159 | Coils | Coil | 14 | 34 | - | - | |
Lcy9g0152 | 159 | PANTHER | MYC | 1 | 143 | IPR045084 | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy6g2225 | Lcy-Chr6:46675617 | Lcy9g0152 | Lcy-Chr9:3319542 | 2.77E-88 | dispersed | |
Lcy9g0152 | Lcy-Chr9:3319542 | Lcy1g1497 | Lcy-Chr1:14691901 | 1.90E-21 | dispersed | |
Lcy4g1409 | Lcy-Chr4:34851813 | Lcy9g0152 | Lcy-Chr9:3319542 | 9.95E-18 | wgd | |
Lcy4g1104 | Lcy-Chr4:21769977 | Lcy9g0152 | Lcy-Chr9:3319542 | 2.40E-21 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy9g0152 | K13422 | - | csv:101205372 | 242.276 |