Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g0284 ATGGCTGATGCGGTTAATATTTCAATTTGGACAGTCGTGGTTTGTTTGGTTGTATTGGGATGGAAAGTTCTGAACTGGATTTGGCTGAGGCCGAAGAAATTAGAGAAGCTTCTGAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGGACAGAGCCGCCATGAGGGAGCGGGCAATATCCAAGCCGATGAACTTCTCCAATGATATTGCTCCACGTGTTAATCCTTCTATTCATCATACCATCCAGAATTATGGTAAGAATTCATTTATGTGGATTGGCCCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAACTGTGTTTACATTAATCAATGATTTCCAAAAGCCAAGCATGAATCCTCTGGTCAAGTTGCTTGCACATGGACTCTTAAACCATGAAGGAGCAAAATGGGCCAAACATAGAAAGATAATCAATCCTGCATTTCATTTAGAAAAGCTCAAGGACATGGTACCAGCATTCTATCACAGTGCTAACGAGATGGTTAGCAAATGGGAAAGCATGGTTTCTGAAGAGGGATCATGTGAGTTGGATGTAATGCCTTATCTACAAAATATGGCTGCTGATGTCATTTCTCGAACAGCATTTGGAAGTAGCTACGAAGAAGGAAAAAAGATCTTCAAGCTTCAAACTGAATTAGCTGATTTAGTGATTCAATCTACCATGGGAATTTATATTCCAGGATGGAGATTTCTACCCACAACGTCAAACAACAAAATTAAAGAGATGAGTAATGAGATAAAAACTTTAATCTTGGGTGTCATAAATGAAAGACAAGAGTCTATGAAGGCAGGTGAAACTATACAGGGCGATCTGTTAGGCATTCTCATGGAATCCAATTGCAAAGAAATTCGAGAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGATGAGTGCAAGCTTTTCTACATCGCTGGCCAAGAAACTACAGCTACATTACTAATTTGGACGATGGTTTTATTGAGTTCATACTCAGAATGGCAAGAGCGAGCAAGAAAAGAGGTCTTCGAGGTCTTTGGTAACAAGAAACCAGATTATGATGGTTTAAGTCGCCTAAAAATTGTAACTATGATCCTGAATGAGGTTCTCAGGTTATACCCACCAGTGAGCCTGCTTGCTCGTCTTGTTAAAAAAGAAACACGACTTGGAAAATTGACGTTACCAGCAGGAGTGATGATAGGCTTACCTATGATTTTTATCCAGCGTGATCGTGAACTATGGGGTGAAGATGCAGATGAATTCAAACCAGAAAGATTTTCTGAAGGAGTTTCTAAAGCAACGAAAAATCCAACCGCTTTCATCCCATTTGGTTGGGGTCCTCGTATATGCATAGGACTAAACTTTGCTATGATTGAAGCAAAAATGGCATTATCAATAATCCTACAACACTTCTCATTTGAGCTTTCTTCGTCATATACTCATGCTCCTATCGTAGCTATAACAACACAACCTCAACATGGAGCTCATGTTGTCCTACACAAATTGTAG 1551 39.91 MADAVNISIWTVVVCLVVLGWKVLNWIWLRPKKLEKLLRQQGFAGNSYRILYGDLKDRAAMRERAISKPMNFSNDIAPRVNPSIHHTIQNYGKNSFMWIGPIPRVHIMDPEQLKTVFTLINDFQKPSMNPLVKLLAHGLLNHEGAKWAKHRKIINPAFHLEKLKDMVPAFYHSANEMVSKWESMVSEEGSCELDVMPYLQNMAADVISRTAFGSSYEEGKKIFKLQTELADLVIQSTMGIYIPGWRFLPTTSNNKIKEMSNEIKTLILGVINERQESMKAGETIQGDLLGILMESNCKEIREHGNNKDIGMSIEDVIDECKLFYIAGQETTATLLIWTMVLLSSYSEWQERARKEVFEVFGNKKPDYDGLSRLKIVTMILNEVLRLYPPVSLLARLVKKETRLGKLTLPAGVMIGLPMIFIQRDRELWGEDADEFKPERFSEGVSKATKNPTAFIPFGWGPRICIGLNFAMIEAKMALSIILQHFSFELSSSYTHAPIVAITTQPQHGAHVVLHKL 516
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 7371433 7374500 + Maker00021526 Lcy9g0284 641400
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g0284 516 Gene3D Cytochrome P450 75 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 CDD CYP72 81 512 - -
Lcy9g0284 516 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy9g0284 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 508 IPR050665 GO:0004497(PANTHER)
Lcy9g0284 516 Pfam Cytochrome P450 86 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 FunFam Cytochrome P450 734A1 28 516 - -
Lcy9g0284 516 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy9g0284 516 SUPERFAMILY Cytochrome P450 80 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy7g1100 Lcy-Chr7:11903376 Lcy9g0284 Lcy-Chr9:7371433 6.26E-86 dispersed
Lcy7g1103 Lcy-Chr7:11965621 Lcy9g0284 Lcy-Chr9:7371433 1.95E-85 dispersed
Lcy9g0284 Lcy-Chr9:7371433 Lcy9g1421 Lcy-Chr9:39208785 0 dispersed
Lcy2g0953 Lcy-Chr2:8864475 Lcy9g0284 Lcy-Chr9:7371433 5.62E-173 transposed
Lcy2g1679 Lcy-Chr2:25043966 Lcy9g0284 Lcy-Chr9:7371433 2.28E-275 wgd
Lcy2g1758 Lcy-Chr2:28016628 Lcy9g0284 Lcy-Chr9:7371433 6.87E-265 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g0284 - - - 0.0