Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy9g0404 GATCCAATAATGTCTCCTCTTTCAAGGCTTTTGTTCCTCAGTTTCTGCTTCTCTTTGCTATTTTTAAGCTCAAATTCACAAAATGATGATCAAAAGGCAAGTCCCTTCTCTTTCATTTTAACGTATATTGTGTATATGGGAAGTCATCCAAAAGGCAAGGTTTCGACTCCATCTCACCATATAAGATTGCTACGAGAAACCATTGGCAGTACTTTTGCTCCGGACTCTTTACTCCATAGCTACAAGAGAAGCTTCAATGGATTCGTGGTAAAGCTGACTGAAGCTGAAGCAAAGAAAGTTTCAAAAATGGAAGGGGTAGTATCAGTTTTTCCAAATGGAATAAAACAACTCCACACAACAAGGTCTTGGGACTTCATGGGTTTCTCCGAACAAGTCGATCGAGTTCCGTCAGTAGAAAGCAACATCATAGTTGGAGTATTTGACAGTGGGATTTGGCCGGAATCTCCCAGTTTTGACGACAAAGGATACGGTCCGCCGCCGACCAAGTGGAAGGGCAGCTGTGAAGTCTCCGCCAATTTCTCTTGCAACAATAAAATCATCGGAGCTCGATCATATCGTAGCGCTGGTCAACATCCAGAAGATGACATCCGAGGTCCAAGAGATTCAAACGGCCACGGGACACACACAGCATCAACTGTGGCCGGAGGGTTAGTGAGGCAAGTGAGCATGATGGGTCTCGGCCGCGGCACGGCGAGGGGTGGAGTCCCATCAGCACGCATTGCTGTTTACAAAGTATGCTGGTCCGATGGCTGTCACGACGCTGACATTCTTGCTGCATTCGACGACGCCATCGCTGACGGTGTCGATATCATCTCCGGCTCTCTCGGGGCATCAAGGGTCGGAGATTACTTCAACGACTCCATAGCCATTGGATCTTTCCATGCAATGAAGAAGGGAATCCTCACGTCATTGGCTGTCGGAAACAATGGCCCAGACCTCACAACTATTGTCAACTTTGCCCCGTGGTCTTTGTCGGTGGCGGCCAGCACCACTGATCGGAAATTCACCACTAAAGTTGAGCTCGGAGATGGAAGAGCATTCGATGGAGTTAGCATCAATACATTTGATTTAAATGGAACACAAATTCCATTGGTTTACGCTGGAGATATTCCTAAAGCTCCTTTCGACAAATCCGTGTCCAGGATGTGCTTTGAGGGCACAGTGGACAAGGAGTTGGTGAAGGGTAAAATCGTGGTATGCGATTCGTTAGCTGTACCAGAAGGACTTGTGGCTGTGGAAGGCGCCGCCGGTATTATAATGCAAGACGATTCTCCACAAGACGATACTAACTCTTATCCTTTGCCTGCTTCTCACCTTGCCCCAAAAAAGGGTGCTCTCATTCTCTCTTATATCAACTCAACCAATAGCGTTGCAACAGCAACTATATTGAAGAGCACAGAAAAGAAGCGTAAAAGAGCCCCCATTGTTGCATCTTTTTCTTCAAGGGGTCCAAACCCAATAACCCCCAACATTCTCAAGCCGGATTTGTCTGGTCCTGGTGTTGAAATTCTCGCAGCGTGGCCTTTGACAGTTTCGCCCTCAGGAGCTAAAGATGATAACAAAAGGGTTCTTTATAATATCATTTCAGGGACCTCCATGGCTTGCCCGCATGTCACTGCAGCAGCTGCATATGTGAAGTCATTTCATCCCACTTGGTCTCCTGCTGCACTTAAATCTGCACTTATGACTACCGCATTTCCAATGAGCATTAAACGTAATCCAGATGGAGAGTTTGCATACGGTGCTGGCCACATAAATCCACTAGGTGCAGTGCATCCTGGATTAATCTACAATGCTTCTGAGATCGACTACGTAAAGTTTCTGTGTGGTCAAGGTTACACCACAGAGTTGCTCCAACGAGTCTCAGAAGATAATACCACTTGTTCTCCGAAGAATTCCGACACAGTTTTCGATCTTAACTACCCTTCATTTGCCCTTTCCACACCTACCTCAAAACCCATCAACCAAATTTACAGAAGAAGTGTCACAAATGTTGGATCAAAATATGCAACATATAAAGCCACCATAGTTAATCCTTCAAAGAATCTTGAGATTACAGTAAAGCCTTCTGTTCTTTCATTCAAGAATTTGGGAGAAGAGCAAAGCTTTGAGCTTACAATTAAAGGAAGAATTGGGAAAAATATTGAATCAGCTTCCTTGGTGTGGGATGATGGTAGACACAAAGTGAAGAGTCCTATTACCGTTTTTGATGCTAATATTCACTCTACCTAA 2253 45.1 DPIMSPLSRLLFLSFCFSLLFLSSNSQNDDQKASPFSFILTYIVYMGSHPKGKVSTPSHHIRLLRETIGSTFAPDSLLHSYKRSFNGFVVKLTEAEAKKVSKMEGVVSVFPNGIKQLHTTRSWDFMGFSEQVDRVPSVESNIIVGVFDSGIWPESPSFDDKGYGPPPTKWKGSCEVSANFSCNNKIIGARSYRSAGQHPEDDIRGPRDSNGHGTHTASTVAGGLVRQVSMMGLGRGTARGGVPSARIAVYKVCWSDGCHDADILAAFDDAIADGVDIISGSLGASRVGDYFNDSIAIGSFHAMKKGILTSLAVGNNGPDLTTIVNFAPWSLSVAASTTDRKFTTKVELGDGRAFDGVSINTFDLNGTQIPLVYAGDIPKAPFDKSVSRMCFEGTVDKELVKGKIVVCDSLAVPEGLVAVEGAAGIIMQDDSPQDDTNSYPLPASHLAPKKGALILSYINSTNSVATATILKSTEKKRKRAPIVASFSSRGPNPITPNILKPDLSGPGVEILAAWPLTVSPSGAKDDNKRVLYNIISGTSMACPHVTAAAAYVKSFHPTWSPAALKSALMTTAFPMSIKRNPDGEFAYGAGHINPLGAVHPGLIYNASEIDYVKFLCGQGYTTELLQRVSEDNTTCSPKNSDTVFDLNYPSFALSTPTSKPINQIYRRSVTNVGSKYATYKATIVNPSKNLEITVKPSVLSFKNLGEEQSFELTIKGRIGKNIESASLVWDDGRHKVKSPITVFDANIHST 750
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 11378610 11384526 + Maker00004549 Lcy9g0404 641520
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy9g0404 750 MobiDBLite consensus disorder prediction 193 217 - -
Lcy9g0404 750 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Lcy9g0404 750 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 118 IPR037045 -
Lcy9g0404 750 SUPERFAMILY Subtilisin-like 122 598 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy9g0404 750 Pfam Subtilase family 140 588 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy9g0404 750 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Lcy9g0404 750 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Lcy9g0404 750 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Lcy9g0404 750 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 740 IPR045051 -
Lcy9g0404 750 Gene3D - 339 476 - -
Lcy9g0404 750 CDD PA_subtilisin_like 346 469 - -
Lcy9g0404 750 Pfam Fibronectin type-III domain 645 742 IPR041469 -
Lcy9g0404 750 FunFam Subtilisin-like protease SBT1.5 141 357 - -
Lcy9g0404 750 Gene3D - 615 744 - -
Lcy9g0404 750 Pfam Peptidase inhibitor I9 41 118 IPR010259 -
Lcy9g0404 750 Gene3D Peptidase S8/S53 domain 141 611 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy9g0404 750 CDD Peptidases_S8_3 115 572 IPR034197 -
Lcy9g0404 750 ProSiteProfiles Serine proteases, subtilase domain profile. 122 598 - -
Lcy9g0404 750 MobiDBLite consensus disorder prediction 195 209 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy12g0049 Lcy-Chr12:741855 Lcy9g0404 Lcy-Chr9:11378610 0 dispersed
Lcy12g0050 Lcy-Chr12:748850 Lcy9g0404 Lcy-Chr9:11378610 3.06e-317 dispersed
Lcy7g0566 Lcy-Chr7:4986276 Lcy9g0404 Lcy-Chr9:11378610 8.65e-320 dispersed
Lcy7g0567 Lcy-Chr7:5006190 Lcy9g0404 Lcy-Chr9:11378610 1.48E-303 dispersed
Lcy7g0929 Lcy-Chr7:9482912 Lcy9g0404 Lcy-Chr9:11378610 9.62E-187 dispersed
Lcy7g0930 Lcy-Chr7:9508401 Lcy9g0404 Lcy-Chr9:11378610 0 dispersed
Lcy7g0931 Lcy-Chr7:9516796 Lcy9g0404 Lcy-Chr9:11378610 2.28E-273 dispersed
Lcy7g1188 Lcy-Chr7:14009430 Lcy9g0404 Lcy-Chr9:11378610 3.38E-65 dispersed
Lcy7g1236 Lcy-Chr7:15396160 Lcy9g0404 Lcy-Chr9:11378610 3.24E-202 dispersed
Lcy7g1237 Lcy-Chr7:15436047 Lcy9g0404 Lcy-Chr9:11378610 3.71E-204 dispersed
Lcy9g0404 Lcy-Chr9:11378610 Lcy9g2281 Lcy-Chr9:47238638 1.21E-160 dispersed
Lcy1g1264 Lcy-Chr1:11957413 Lcy9g0404 Lcy-Chr9:11378610 7.28E-181 transposed
Lcy8g2068 Lcy-Chr8:46889792 Lcy9g0404 Lcy-Chr9:11378610 1.18E-187 transposed
Lcy5g1286 Lcy-Chr5:30433930 Lcy9g0404 Lcy-Chr9:11378610 1.03E-29 wgd
Lcy5g1327 Lcy-Chr5:31636800 Lcy9g0404 Lcy-Chr9:11378610 5.16E-160 wgd
Lcy6g1892 Lcy-Chr6:39553274 Lcy9g0404 Lcy-Chr9:11378610 5.85E-174 wgd
Lcy6g1866 Lcy-Chr6:38925391 Lcy9g0404 Lcy-Chr9:11378610 1.94E-129 wgd
Lcy9g0103 Lcy-Chr9:2228919 Lcy9g0404 Lcy-Chr9:11378610 4.81E-135 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy9g0404 - - - 0.0