Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy9g0404 | GATCCAATAATGTCTCCTCTTTCAAGGCTTTTGTTCCTCAGTTTCTGCTTCTCTTTGCTATTTTTAAGCTCAAATTCACAAAATGATGATCAAAAGGCAAGTCCCTTCTCTTTCATTTTAACGTATATTGTGTATATGGGAAGTCATCCAAAAGGCAAGGTTTCGACTCCATCTCACCATATAAGATTGCTACGAGAAACCATTGGCAGTACTTTTGCTCCGGACTCTTTACTCCATAGCTACAAGAGAAGCTTCAATGGATTCGTGGTAAAGCTGACTGAAGCTGAAGCAAAGAAAGTTTCAAAAATGGAAGGGGTAGTATCAGTTTTTCCAAATGGAATAAAACAACTCCACACAACAAGGTCTTGGGACTTCATGGGTTTCTCCGAACAAGTCGATCGAGTTCCGTCAGTAGAAAGCAACATCATAGTTGGAGTATTTGACAGTGGGATTTGGCCGGAATCTCCCAGTTTTGACGACAAAGGATACGGTCCGCCGCCGACCAAGTGGAAGGGCAGCTGTGAAGTCTCCGCCAATTTCTCTTGCAACAATAAAATCATCGGAGCTCGATCATATCGTAGCGCTGGTCAACATCCAGAAGATGACATCCGAGGTCCAAGAGATTCAAACGGCCACGGGACACACACAGCATCAACTGTGGCCGGAGGGTTAGTGAGGCAAGTGAGCATGATGGGTCTCGGCCGCGGCACGGCGAGGGGTGGAGTCCCATCAGCACGCATTGCTGTTTACAAAGTATGCTGGTCCGATGGCTGTCACGACGCTGACATTCTTGCTGCATTCGACGACGCCATCGCTGACGGTGTCGATATCATCTCCGGCTCTCTCGGGGCATCAAGGGTCGGAGATTACTTCAACGACTCCATAGCCATTGGATCTTTCCATGCAATGAAGAAGGGAATCCTCACGTCATTGGCTGTCGGAAACAATGGCCCAGACCTCACAACTATTGTCAACTTTGCCCCGTGGTCTTTGTCGGTGGCGGCCAGCACCACTGATCGGAAATTCACCACTAAAGTTGAGCTCGGAGATGGAAGAGCATTCGATGGAGTTAGCATCAATACATTTGATTTAAATGGAACACAAATTCCATTGGTTTACGCTGGAGATATTCCTAAAGCTCCTTTCGACAAATCCGTGTCCAGGATGTGCTTTGAGGGCACAGTGGACAAGGAGTTGGTGAAGGGTAAAATCGTGGTATGCGATTCGTTAGCTGTACCAGAAGGACTTGTGGCTGTGGAAGGCGCCGCCGGTATTATAATGCAAGACGATTCTCCACAAGACGATACTAACTCTTATCCTTTGCCTGCTTCTCACCTTGCCCCAAAAAAGGGTGCTCTCATTCTCTCTTATATCAACTCAACCAATAGCGTTGCAACAGCAACTATATTGAAGAGCACAGAAAAGAAGCGTAAAAGAGCCCCCATTGTTGCATCTTTTTCTTCAAGGGGTCCAAACCCAATAACCCCCAACATTCTCAAGCCGGATTTGTCTGGTCCTGGTGTTGAAATTCTCGCAGCGTGGCCTTTGACAGTTTCGCCCTCAGGAGCTAAAGATGATAACAAAAGGGTTCTTTATAATATCATTTCAGGGACCTCCATGGCTTGCCCGCATGTCACTGCAGCAGCTGCATATGTGAAGTCATTTCATCCCACTTGGTCTCCTGCTGCACTTAAATCTGCACTTATGACTACCGCATTTCCAATGAGCATTAAACGTAATCCAGATGGAGAGTTTGCATACGGTGCTGGCCACATAAATCCACTAGGTGCAGTGCATCCTGGATTAATCTACAATGCTTCTGAGATCGACTACGTAAAGTTTCTGTGTGGTCAAGGTTACACCACAGAGTTGCTCCAACGAGTCTCAGAAGATAATACCACTTGTTCTCCGAAGAATTCCGACACAGTTTTCGATCTTAACTACCCTTCATTTGCCCTTTCCACACCTACCTCAAAACCCATCAACCAAATTTACAGAAGAAGTGTCACAAATGTTGGATCAAAATATGCAACATATAAAGCCACCATAGTTAATCCTTCAAAGAATCTTGAGATTACAGTAAAGCCTTCTGTTCTTTCATTCAAGAATTTGGGAGAAGAGCAAAGCTTTGAGCTTACAATTAAAGGAAGAATTGGGAAAAATATTGAATCAGCTTCCTTGGTGTGGGATGATGGTAGACACAAAGTGAAGAGTCCTATTACCGTTTTTGATGCTAATATTCACTCTACCTAA | 2253 | 45.1 | DPIMSPLSRLLFLSFCFSLLFLSSNSQNDDQKASPFSFILTYIVYMGSHPKGKVSTPSHHIRLLRETIGSTFAPDSLLHSYKRSFNGFVVKLTEAEAKKVSKMEGVVSVFPNGIKQLHTTRSWDFMGFSEQVDRVPSVESNIIVGVFDSGIWPESPSFDDKGYGPPPTKWKGSCEVSANFSCNNKIIGARSYRSAGQHPEDDIRGPRDSNGHGTHTASTVAGGLVRQVSMMGLGRGTARGGVPSARIAVYKVCWSDGCHDADILAAFDDAIADGVDIISGSLGASRVGDYFNDSIAIGSFHAMKKGILTSLAVGNNGPDLTTIVNFAPWSLSVAASTTDRKFTTKVELGDGRAFDGVSINTFDLNGTQIPLVYAGDIPKAPFDKSVSRMCFEGTVDKELVKGKIVVCDSLAVPEGLVAVEGAAGIIMQDDSPQDDTNSYPLPASHLAPKKGALILSYINSTNSVATATILKSTEKKRKRAPIVASFSSRGPNPITPNILKPDLSGPGVEILAAWPLTVSPSGAKDDNKRVLYNIISGTSMACPHVTAAAAYVKSFHPTWSPAALKSALMTTAFPMSIKRNPDGEFAYGAGHINPLGAVHPGLIYNASEIDYVKFLCGQGYTTELLQRVSEDNTTCSPKNSDTVFDLNYPSFALSTPTSKPINQIYRRSVTNVGSKYATYKATIVNPSKNLEITVKPSVLSFKNLGEEQSFELTIKGRIGKNIESASLVWDDGRHKVKSPITVFDANIHST | 750 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 11378610 | 11384526 | + | Maker00004549 | Lcy9g0404 | 641520 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy9g0404 | 750 | MobiDBLite | consensus disorder prediction | 193 | 217 | - | - | |
| Lcy9g0404 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 537 | 547 | IPR023828 | - | |
| Lcy9g0404 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 24 | 118 | IPR037045 | - | |
| Lcy9g0404 | 750 | SUPERFAMILY | Subtilisin-like | 122 | 598 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lcy9g0404 | 750 | Pfam | Subtilase family | 140 | 588 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Lcy9g0404 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 139 | 158 | IPR015500 | - | |
| Lcy9g0404 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 536 | 552 | IPR015500 | - | |
| Lcy9g0404 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 208 | 221 | IPR015500 | - | |
| Lcy9g0404 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 41 | 740 | IPR045051 | - | |
| Lcy9g0404 | 750 | Gene3D | - | 339 | 476 | - | - | |
| Lcy9g0404 | 750 | CDD | PA_subtilisin_like | 346 | 469 | - | - | |
| Lcy9g0404 | 750 | Pfam | Fibronectin type-III domain | 645 | 742 | IPR041469 | - | |
| Lcy9g0404 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 141 | 357 | - | - | |
| Lcy9g0404 | 750 | Gene3D | - | 615 | 744 | - | - | |
| Lcy9g0404 | 750 | Pfam | Peptidase inhibitor I9 | 41 | 118 | IPR010259 | - | |
| Lcy9g0404 | 750 | Gene3D | Peptidase S8/S53 domain | 141 | 611 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Lcy9g0404 | 750 | CDD | Peptidases_S8_3 | 115 | 572 | IPR034197 | - | |
| Lcy9g0404 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 122 | 598 | - | - | |
| Lcy9g0404 | 750 | MobiDBLite | consensus disorder prediction | 195 | 209 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy12g0049 | Lcy-Chr12:741855 | Lcy9g0404 | Lcy-Chr9:11378610 | 0 | dispersed | |
| Lcy12g0050 | Lcy-Chr12:748850 | Lcy9g0404 | Lcy-Chr9:11378610 | 3.06e-317 | dispersed | |
| Lcy7g0566 | Lcy-Chr7:4986276 | Lcy9g0404 | Lcy-Chr9:11378610 | 8.65e-320 | dispersed | |
| Lcy7g0567 | Lcy-Chr7:5006190 | Lcy9g0404 | Lcy-Chr9:11378610 | 1.48E-303 | dispersed | |
| Lcy7g0929 | Lcy-Chr7:9482912 | Lcy9g0404 | Lcy-Chr9:11378610 | 9.62E-187 | dispersed | |
| Lcy7g0930 | Lcy-Chr7:9508401 | Lcy9g0404 | Lcy-Chr9:11378610 | 0 | dispersed | |
| Lcy7g0931 | Lcy-Chr7:9516796 | Lcy9g0404 | Lcy-Chr9:11378610 | 2.28E-273 | dispersed | |
| Lcy7g1188 | Lcy-Chr7:14009430 | Lcy9g0404 | Lcy-Chr9:11378610 | 3.38E-65 | dispersed | |
| Lcy7g1236 | Lcy-Chr7:15396160 | Lcy9g0404 | Lcy-Chr9:11378610 | 3.24E-202 | dispersed | |
| Lcy7g1237 | Lcy-Chr7:15436047 | Lcy9g0404 | Lcy-Chr9:11378610 | 3.71E-204 | dispersed | |
| Lcy9g0404 | Lcy-Chr9:11378610 | Lcy9g2281 | Lcy-Chr9:47238638 | 1.21E-160 | dispersed | |
| Lcy1g1264 | Lcy-Chr1:11957413 | Lcy9g0404 | Lcy-Chr9:11378610 | 7.28E-181 | transposed | |
| Lcy8g2068 | Lcy-Chr8:46889792 | Lcy9g0404 | Lcy-Chr9:11378610 | 1.18E-187 | transposed | |
| Lcy5g1286 | Lcy-Chr5:30433930 | Lcy9g0404 | Lcy-Chr9:11378610 | 1.03E-29 | wgd | |
| Lcy5g1327 | Lcy-Chr5:31636800 | Lcy9g0404 | Lcy-Chr9:11378610 | 5.16E-160 | wgd | |
| Lcy6g1892 | Lcy-Chr6:39553274 | Lcy9g0404 | Lcy-Chr9:11378610 | 5.85E-174 | wgd | |
| Lcy6g1866 | Lcy-Chr6:38925391 | Lcy9g0404 | Lcy-Chr9:11378610 | 1.94E-129 | wgd | |
| Lcy9g0103 | Lcy-Chr9:2228919 | Lcy9g0404 | Lcy-Chr9:11378610 | 4.81E-135 | wgd |
Pathway information